Shewanella sp. MR-4: Shewmr4_0893
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Entry
Shewmr4_0893 CDS
T00388
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
she
Shewanella sp. MR-4
Pathway
she03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
she00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Shewmr4_0893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
she03400
]
Shewmr4_0893
Enzymes [BR:
she01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Shewmr4_0893
DNA repair and recombination proteins [BR:
she03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Shewmr4_0893
Prokaryotic type
Shewmr4_0893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABI37973
LinkDB
All DBs
Position
1044926..1045585
Genome browser
AA seq
219 aa
AA seq
DB search
MATWQAFIDHQRSQPYYQQLIAFVNQERELGKVIYPPKEDVYNAFKTTPLEQVRVVLIGQ
DPYHGPDQAHGLCFSVKRGIKPPPSLANMYKELVNDIPGFQIPNHGDLTQWAEQGILMLN
TVLTVEQGQAHSHANAGWETFTTEALKLLNAQERPIIFVLWGSHAIKKGAVITAPQHQIL
SGPHPSPLSAYRGFFGCGHFSKVNQLLMARGEAPIQWQV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttggcgacttggcaggcatttattgaccatcaacgttctcaaccctattaccagcagttg
atagcatttgtgaatcaagagcgtgaattgggtaaggtgatctatcctcctaaagaggat
gtgtataacgcctttaaaacaaccccattggagcaagtgcgtgtagtgcttataggtcaa
gatccctaccatggccccgaccaagcccacggcctgtgtttctcggttaagcgaggcatt
aaaccgccgccatcgctagccaatatgtataaagagttagtgaacgatattcccggtttc
caaatcccaaatcatggtgatttaacccaatgggcggagcaggggattttgatgcttaat
accgtgctgacggtggaacaagggcaagcccactcacatgccaatgcaggctgggaaacc
tttaccactgaggccttaaagctgttaaatgcgcaggaacggccgattattttcgtactc
tggggcagtcatgctatcaaaaaaggggcggtgattactgcgccacagcatcaaattctg
tcgggaccccacccgtcaccactgtcggcttatcgcggcttcttcggttgtgggcatttt
tctaaagtgaatcaactgctgatggcgcggggcgaagcaccgatccaatggcaggtttaa
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