Shewanella sp. MR-4: Shewmr4_0933
Help
Entry
Shewmr4_0933 CDS
T00388
Name
(GenBank) TRAP dicarboxylate transporter-DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
she
Shewanella sp. MR-4
Pathway
she02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
she00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shewmr4_0933
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_0933
Transporters [BR:
she02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shewmr4_0933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
YqeY
Motif
Other DBs
NCBI-ProteinID:
ABI38013
LinkDB
All DBs
Position
1089622..1090737
Genome browser
AA seq
371 aa
AA seq
DB search
MRHLGSLLLAVLLIGLGGCNPAPSQTEQISASPHPDSTPVKEVIEWRLATSWPKNFAGLG
MAPERFAKLVNDMSHGRLQIHVYGAGELMPAFAVFDGVSQGKVQMAHAASYYWKGKAPAS
QFFSSIPFGMTAQEMNGWLHYGGGMALWEEVYRPFGIIPLAGGNTGMQMGGWFNKPINTI
ADFKGLKIRMPGLGGEVLKRVGAVPVNMAGRELYGALQTGSIDAAEWVGPVNDLAFGLHK
VAKYYYYPGWHEPGSNMEFLINKAAFESLPEDLQAIVKGAARAINQDMLDEYTTRNVTAL
ETLVKDEGVVLKAFPPEVLSELERISQQVIEEQAEQDPMMRKVYRAYHAYEQGVREYHKI
SEDAYSQQRQH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatttggggagtctattgcttgcggtattactgattggactcggtgggtgtaat
cctgcgccttcacagaccgaacagatttctgcatcgccccatcctgactcgactcccgtc
aaagaggtgattgagtggcgcttagccacatcgtggccgaaaaacttcgccggtttaggt
atggcgcctgagcgttttgctaagttggtgaacgacatgtcccatggccgtttacaaatt
catgtatatggcgcgggtgagttaatgccggcctttgcggtattcgacggggtgagccaa
ggtaaagtgcagatggcccacgccgcctcctattattggaaggggaaagcgcccgcctca
cagtttttttcttctatcccttttggcatgacggcccaagagatgaacggctggctgcat
tatggtggcggcatggcactgtgggaggaagtctatcgtccctttggtattattccatta
gcgggtggcaatacgggcatgcagatgggcggctggtttaataaacccatcaacactatt
gccgactttaaaggcttgaagatccgtatgccaggcctagggggcgaagtgctgaaacgt
gtcggtgccgttcccgtcaatatggctggcagggagctttatggcgctttgcaaacgggg
tcgattgatgcggcggagtgggttgggccagtaaacgatcttgcctttggcttacataaa
gtcgccaaatattactattatcccggctggcatgagcctggctccaatatggagtttttg
atcaataaagccgcttttgagagtctgcccgaagatttacaggccatagtcaaaggcgcg
gcgcgtgctatcaatcaagatatgttggacgaatacaccacgcgtaacgtgacagccctt
gaaaccttagtaaaagacgagggtgtggtgctgaaggcattcccgcccgaggtgcttagc
gagcttgaacgtatttcacagcaggtcattgaagagcaggcggagcaggaccctatgatg
cgcaaagtgtaccgcgcttaccatgcgtatgagcaaggtgtacgtgagtatcataaaatt
tctgaagatgcttacagccaacagcggcagcattaa
DBGET
integrated database retrieval system
