Shewanella sp. MR-4: Shewmr4_0966
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Entry
Shewmr4_0966 CDS
T00388
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
she
Shewanella sp. MR-4
Pathway
she00220
Arginine biosynthesis
she00240
Pyrimidine metabolism
she00250
Alanine, aspartate and glutamate metabolism
she01100
Metabolic pathways
she01110
Biosynthesis of secondary metabolites
she01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Shewmr4_0966
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Shewmr4_0966
00220 Arginine biosynthesis
Shewmr4_0966
Enzymes [BR:
she01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Shewmr4_0966
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
ATPgrasp_Ter
ATP-grasp_4
Dala_Dala_lig_C
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABI38046
LinkDB
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Position
1129996..1133220
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIQWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRAGIAHSMEEAYGVLDLVGFPCIIRPSFTMGGSGGG
IAYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQLMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVP
RFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVSRHGFDPITDLTKPDA
LARIRLELKEPGCDRIWYIADAMRAGLTLDEIFRLTNIDPWFLVQIEELIKLEGQVAEGG
LAGLNEELLRKLKRKGFADARLAAVLGVNETEVRKLRDRFDIHPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSDREKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIGYPLVVRPSYVLG
GRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDAVCDGETVVIGAIMEH
IEQAGVHSGDSGCSLPPYTLSQAIQDEMRVQVRKLAMELGVVGLMNVQFAVKNNEIYMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQNFTEEVIPPFYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALLSVRNSDKKRVADLA
AKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIVNTTEGRQ
AIEDSRQLRRGALRYKVNYTTTMNAAFATCMAHAADDRTNVTSVQELHQRVLAK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaagagtattcttatcctaggtgcaggcccgattgtcatt
ggtcaggcgtgtgagttcgactattcaggcgctcaagcctgtaaagccctgcgtgaagaa
ggttaccgcgtcattctggtgaactctaaccctgccaccattatgaccgaccctgaaatg
gccgatgccacttacatcgagccaatccaatgggaagtggtacgtaacattatcgctaaa
gaacgtcctgatgcgattctgccaaccatgggcggtcaaaccgcgctgaactgcgccctt
gagcttgaagccaaaggcgtactggctgaattcaacgttgaaatgatcggtgcaaccgcc
gatgcgattgataaagcagaagaccgtagccgcttcgacaaagccatgaagagcattggc
ttagagtgtccacgcgcgggcatcgcccacagcatggaagaagcctatggcgtgctcgac
ctcgttggtttcccttgtattatccgtccatcattcactatgggtggctcaggcggtggt
atcgcctacaacaaggaagagttcgaagaaatctgttctcaaggtttagatttatcgcca
accaaagagctgctcatcgacgagagcttaatcggttggaaagaatacgagatggaagtg
gttcgtgaccgtaacgacaactgtatcatcgtgtgttctatcgaaaacttcgacccaatg
ggcgtgcacactggtgactctattaccgttgcgccagcacaaaccctgacagacaaagaa
taccaactgatgcgtaacgcctctatggcagtactgcgtgagattggtgttgaaaccggt
ggttcgaacgtacagtttggtatcaatccgaaagatggccgtatggtgatcatcgagatg
aacccacgcgtatcacgttcatcggcactggcgtctaaagcgacaggcttcccgattgcg
aaaatcgccgccaagttagcggtcggtttcaccctcgatgagctgatgaacgacattact
ggtggccgtacgccagcgtcattcgagccagccatcgactacgtcgtgactaaagtacct
cgctttaactttgaaaaatttgccggatcaaacgatcgcctaaccacgcagatgaagtca
gtgggcgaagtgatggcaattggccgtactttccaagagtcactgcaaaaagccctgcgc
ggtttagaagtgagccgtcacggctttgacccaatcactgacttaaccaaacccgatgcc
ttagcgcgcattcgcctcgagctgaaagagccaggctgtgaccgtatttggtacattgcc
gacgctatgcgtgcgggtttaaccctggatgaaatcttccgtttaaccaacatcgaccca
tggttcttagtccagattgaagagctgattaagctggaaggccaagtggccgaaggcggt
ttagccggtcttaacgaagagctgctgcgtaagcttaagcgtaaaggctttgccgatgcg
cgtctggcagcggtccttggcgtaaacgagactgaagtccgtaaactgcgtgaccgtttc
gatatccacccagtttacaagcgcgtagatacctgcgcggctgaatttgccaccgacacc
gcttacatgtactcaacctatgaggaagagtgtgaagcgaacccatctgaccgtgagaaa
atcatggtgttaggtggtggtccaaaccgtatcggtcaaggtatcgaattcgattactgc
tgtgtgcacgcggcattagccctacgtgaagacggttacgaaaccatcatggtgaactgt
aaccctgaaaccgtttctaccgactacgacacttcagatcgtctgtacttcgagcctgtt
actttagaagacgtgttagaaatcgtccgtatcgagaagccaaagggcgttatcgtgcag
tacggtggtcaaactccgctgaaactggctcgcgcccttgaggcggcgggtgtgccaatt
attggtactagcccagatgcgattgaccgtgctgaagaccgtgagcgtttccagcaagcg
attcaacgtctggaaatgaagcagcctgaaaacgatacagtcaccaccgttgaaggtgct
gtgattgccgccgagcgtatcggttatccattagttgttcgtccatcctacgtactgggc
ggccgcgcgatggaaatcgtttacgaccaacaggatttactgcgctacttcaacgaagcg
gtaagcgtatctaacgcttcgccagtactgttagaccacttcctagacgatgctatcgaa
gtggatatcgacgcagtatgtgacggtgaaaccgtagttatcggcgcgattatggagcat
atcgagcaggcgggtgttcactcaggtgactctggctgttcgctgcctccttacacctta
agccaagctatccaagacgaaatgcgcgtgcaagtgcgtaagttggcgatggagctgggt
gttgtcggtctgatgaacgtacagtttgccgtgaagaataacgaaatctacatgattgaa
gttaacccacgtgcagcgcgtaccgtgccattcgtatcgaaagcgacaggcgtgccgtta
gctaagattgccgcccgtgtgatggcgggtcaaagcttgaaggcgcaaaactttactgaa
gaagtgatcccacctttctactcagtgaaagaagtggtactgccatttaacaagttccct
ggcgttgacccactgttaggcccagaaatgcgctcaacaggtgaggtgatgggcgtgggc
gataccttcgccgaagcctatgctaaggcgcagttaggtgcgacttctgaagtgcctaag
tctggtcgtgctctcttgtctgtgcgtaacagcgacaagaaacgtgttgccgacttagcc
gctaagttgattgagctgggttatcaaatcgatgccacccacggtactgcggttatccta
ggtgaagcgggtatcaacccacgcttagtgaacaaggtacacgaaggccgtccacacatt
cttgaccgcatcaagaacggtgaatacacctatatcgtgaacaccaccgaaggccgtcaa
gcgattgaagactctcgtcaattacgtcgcggtgcactgcgttacaaagtgaactatacc
acgaccatgaacgcagcattcgccacttgtatggcacacgctgcggacgaccgcactaac
gtgacgtcagtgcaagagctgcatcagcgcgtattggcaaaataa
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