Shewanella sp. MR-4: Shewmr4_1004
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Entry
Shewmr4_1004 CDS
T00388
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
she03016
]
Shewmr4_1004
Enzymes [BR:
she01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Shewmr4_1004
Transfer RNA biogenesis [BR:
she03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Shewmr4_1004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Fe-ADH
B12-binding
LuxC
Motif
Other DBs
NCBI-ProteinID:
ABI38084
UniProt:
Q0HLI3
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All DBs
Position
complement(1170935..1172359)
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AA seq
474 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSSKMADLLGEYQGYTLTEEAEEADILLLNTCSIREKAQEKVF
HQLGRWKTLKDKNPDLIIGVGGCVASQEGKAIKDRAHCVDIIFGPQTLHRLPDMIEQVRR
GEKAVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPSDD
IILEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICTFAELLRYVAAIDGIDRIRFTTSH
PIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRRLRKARPDI
QISSDFIIGFPGETKEDFADTMKLIEDVAFDHSFSFIYSARPGTPAADLPDDVDMEEKKQ
RLAILQDRITQQAMRYSRHMMGTVQRILVEGPSVKNPMELRGRTENNRVVNFEGLPKHIG
SFVDVEIVDVYTNSLRGKFIRGEDEMDLRRNLRPSDILAKHKQDDDLGVTQFKP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaactccatattaaaacttggggctgtcaaatgaatgagtacgactcatcc
aagatggcggatcttttaggcgaataccaaggttacaccttaactgaagaagcggaagaa
gcagatattctactgctaaacacttgttctatccgcgaaaaagcacaggaaaaagtgttc
catcagttaggtcgttggaagaccctcaaagataaaaatcccgatctgattattggggtt
ggtggttgtgttgcatcgcaggaaggtaaagcgatcaaagaccgcgctcattgcgttgac
attatctttggaccacagacactgcaccgtctgccagatatgatcgagcaagtgcgtcgt
ggcgaaaaggccgtgatcgacgtgagcttccctgaaatcgaaaagtttgaccgtctacca
gaaccgcgcgccgaaggcccaacggcgtttgtgtctatcatggaaggttgcagcaagtac
tgttcattctgcgtggtgccttatacccgtggtgaagaagtcagccgtccatcggacgac
atcatcctcgagattgcccaactggcagaacaaggtgtgcgcgaagtcaacctgctcggt
caaaacgttaacgcctaccgtggtgcaacccacgacggcggcatttgtacctttgccgag
ctattacgctatgttgccgctatcgatggtatcgaccgtattcgcttcaccaccagtcac
ccgattgaatttacgcaggatattatcgacgtttacgaagatactcctgaattagtcagc
ttcctgcacttaccagtgcaatcgggttctgaccgcattctgacggcaatgaagcgtggt
catatggcgattgagtacaagtcaatcatccgccgtctgcgcaaggcccgtcctgatatc
caaatcagctctgactttatcattggcttcccaggcgaaaccaaagaagacttcgccgat
accatgaagctgattgaagatgtggcgtttgaccacagctttagctttatttacagtgcg
cgcccaggtacacctgcggcagatttacccgatgacgttgatatggaagagaaaaagcag
cgtctggcgattctgcaggaccgtatcactcaacaagccatgcgttacagccgccatatg
atgggcacagtacaacgtattctggttgaaggcccatcggtgaaaaaccctatggagctg
cgcggccgtaccgaaaacaaccgtgtcgtcaacttcgaaggtctaccgaagcacattggt
agctttgtggatgtcgaaattgtcgacgtttacactaactcactacgcggtaaatttatc
cgtggtgaagatgagatggatctgcgccgcaacctgcgcccatcggatattctggccaaa
cacaaacaggatgacgatctcggtgtgacacaatttaaaccttaa
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