Shewanella sp. MR-4: Shewmr4_1087
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Entry
Shewmr4_1087 CDS
T00388
Name
(GenBank) type IV pilin biogenesis protein, putative
KO
K02674
type IV pilus assembly protein PilY1
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
she02044
]
Shewmr4_1087
02035 Bacterial motility proteins [BR:
she02035
]
Shewmr4_1087
Secretion system [BR:
she02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Shewmr4_1087
Bacterial motility proteins [BR:
she02035
]
Pilus system
Pilus assembly proteins
Shewmr4_1087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Catalase_C
Motif
Other DBs
NCBI-ProteinID:
ABI38167
LinkDB
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Position
1275549..1279220
Genome browser
AA seq
1223 aa
AA seq
DB search
MISCLFTYQFENRLVFSLARISSLISLNIRPQNVRHTLTSLFSLILSSVIVSAASLFMAP
THADDTELYVFEASARNGSRPQVLIIFDNSGSMSNLAYDVEAPYENKRAVNYAQSGNLFY
SRGSSENAAAPNPNSGREKRKFSGGLNGCESSWEYLNRYGTFTGFFREYGFSGSSGSWRE
FSELNGSSISAVDCFEDIQENKFGNAAGEAQGLPVDSLGTASKPVRYTEASTSSSDNVKS
AAKAKAEKTAFGTGKVVTVYTEDYLNWLHGPKTRVNKTRLALAKDAIESVILTTPGVDFG
LAIFNMNGPYDGQRDGGRIISGIKPMSAAAKIDLLKGVNDINYAQNTPLCETLYEAYRYF
GGQSQYFGDDDSDYDYFDRWGRYLGTYQASRNSFTDPEALVVGTNNYNSPFKRCQNEAYI
IYITDGEPTLDNAADGLVEQLTKGVGKHTSRPVSYLSALSGWMRNEDVNPNSAGKQTVRT
FTIGFSEGAASAEHLLKQTAENGGGKYFDATDASKLRSSLQTALNNILEKNASFTSPSVA
SNNFNRTQTFDSAYYSMFLPNKGPRWLGNIKKFKVTSSGDVVDSKGNNAIGEDGNIKAEA
CSYWTSAEECGASGDGNDVKRGGVLGAMQQAGSRTLYSNLGTGLSPFTLSNASRKAGGDA
RLALYMGVDETELSEHFDWAKGIDVDNDKNQDLSAASGATPNWRADIMGDALHSKPLALN
FGSEDQPDIRIIVGTNHGFLHMFKDEGDSVSETWGFIPYELLPNFRDLKANAPTGVHSVY
GIDGSPVAYTKMQGKRIEKAWVFVGMRRGGNAYYALDITSPDNPTFMWRIDASSPGMGEL
GQSWSTPVVTTIPSATGDKPVLIFGAGYTPATKDGAEIGSDDSQGRGVFIVDAETGALIH
QFGGSGANTQLPGIANSIPSSVAVLDGNGDGRTDRIYATDTQGNVWRMDMPTANTSTWSG
FKFAALGDRSSVASDRRFFSGPTVAQTIITNTFELTQVVNGKSTKTVTTQNIPYDAVVVG
SGHRAKPSDVSRSDMFFALQDRNIVTQSFQGKPNQKPVPSALTLSDLYDVTTAAPSNQAS
EIAFGQKRGWYYDFSRKGEKSLSSATIVQGEVYFTSFVPGSDASVNQCLSSGKGYLYKKN
LHKGTNGYRTDFLYAGELVLDTPQLVIPPAAQPDDPNAKAPTLDMFLIGIGKAVPEEATC
ESGNPKCIGSGPKANKIYYYVDQ
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgtgtttatttacatatcaattcgaaaatcgattggtattctctcttgctcgt
atttcttcgctaatatcccttaacattcgcccacaaaacgttcgtcatacgttaacgtca
ctgttttctcttattctgtcgagtgtaattgtgagtgcggccagtttatttatggcgccg
actcacgccgatgacactgagctttatgttttcgaagcgtccgcccgtaatggctcgcgt
ccgcaggtgctgattatctttgataactcgggcagcatgagtaatctcgcctatgatgtc
gaggcgccctacgagaataagcgcgcagtaaattatgcccaatcgggtaatttattctat
agccgaggttcatcggaaaacgcggctgcgcccaatcctaattcagggcgggaaaaacgt
aagttcagtggtggactcaatggctgcgaaagctcatgggaatatctgaatcgttacggc
acctttacgggtttttttagggaatatggtttttcgggaagctcgggatcttggagagag
ttctcagagcttaacggcagttccatttccgccgtcgattgttttgaggatattcaggaa
aacaagttcggtaacgcggcaggtgaagcccaaggtttacccgtggacagcctagggacg
gcgagcaaaccggttcgttacactgaggccagtactagctcatcagacaatgtaaagtcc
gcggccaaggctaaggcagaaaaaaccgcgtttggtaccggtaaagtggttaccgtctat
accgaagattacttaaactggctgcatggtcctaaaactagggtcaataaaacgcgacta
gccttggctaaagatgcgattgaaagtgtgattttaaccacgccgggtgtggattttggc
ctagcgatttttaatatgaatggcccctatgatgggcagcgtgatggcgggcggattatc
tctgggattaagcctatgtccgctgcagctaaaattgatttgcttaaaggggttaatgat
attaactacgcccaaaatactcccttatgcgaaaccctctatgaggcgtaccgttatttc
ggcgggcagagtcagtattttggtgatgatgacagcgattatgactatttcgaccgctgg
ggacgttatttggggacttaccaagcgagcagaaactcttttaccgatcccgaagcgtta
gtcgtggggaccaataactataactcgcccttcaaacgttgccaaaatgaagcctatatc
atctatatcaccgacggtgaacccacgctggataatgcggccgatggtttggttgaacag
ttaaccaaaggtgttggaaaacatacctctcgccccgtcagctacctcagtgcgctttca
ggctggatgagaaacgaagatgtcaatcctaattctgcgggtaaacaaaccgttagaacc
tttaccatcggttttagtgaaggtgccgccagtgccgaacatttgctgaagcagaccgcc
gaaaatggcggaggtaagtatttcgatgcgaccgatgccagtaaattacgctcttcatta
caaacggccctgaacaatattctcgaaaaaaatgccagctttacctctccctcggtggca
agtaataactttaaccgaacgcaaacctttgattccgcttattactctatgtttttgccg
aacaaagggccgagatggttaggcaatattaagaaattcaaagtcaccagtagtggtgat
gttgtcgatagcaaaggcaacaatgcgataggtgaagatggcaacatcaaagccgaggcc
tgctcctattggacctcggccgaagagtgtggtgcgagtggcgatggtaacgatgtgaag
cggggtggagtgctaggcgcaatgcagcaggcgggtagtcgcaccttgtacagtaattta
ggcacgggattaagcccgtttaccctgtcgaatgcatctcgcaaagcggggggcgatgca
cgtttggccttgtatatgggggtcgatgaaactgagcttagcgagcattttgattgggcc
aagggcatcgatgtcgacaatgacaagaatcaggacctcagtgccgcgagtggcgcaacc
cccaattggcgcgccgatattatgggggatgctttacattccaaacccttagcacttaat
tttggctctgaagatcagcccgatattcggattatcgtggggactaaccatgggttcctg
catatgttcaaggatgaaggcgatagcgtgtctgagacttggggttttatcccctatgag
ttgctgccgaattttcgcgatctgaaggcgaacgcgccaacgggcgtgcactcggtatac
ggtattgatggctcgccagtcgcttacaccaaaatgcagggcaaacgtattgaaaaagcg
tgggtgtttgtggggatgcgtcgtgggggaaatgcttattatgccctcgatatcacctcc
cccgataatcctacttttatgtggaggattgatgccagctcaccgggaatgggcgaatta
ggtcaatcatggtcgacgcctgtcgtcaccacgattccgagtgccactggggataaaccc
gtgctcatcttcggtgcgggatatactccagcgaccaaggatggcgctgagattggcagt
gacgatagccaaggccgaggcgtgtttattgtcgatgccgaaacgggggcgttaatccat
caatttgggggcagtggcgcaaacacccaactgccagggattgccaacagtattccgagc
agcgttgccgtgttagatggtaatggtgatggccgaacggataggatctatgccacagat
acacaagggaatgtgtggcgaatggacatgcctacggcaaatacctcgacctggtcggga
tttaaatttgccgcattaggggataggagttcggtggcaagtgacagacgattcttctcc
ggccccacggtcgcgcagaccattatcaccaataccttcgagttgactcaggtggtgaat
gggaaatcgaccaagacagtgacgacacagaatattccctacgatgccgtagtggtgggc
agcggtcacagggcaaaacctagcgatgtgtcccgttcggatatgttttttgccttgcaa
gataggaacatagtaactcagtcattccaaggtaagcctaatcaaaagcctgtgccgagc
gccttaaccttaagtgacttatacgatgtgactacggcggcgccaagcaaccaagctagc
gaaatcgcctttggccaaaaacggggttggtactatgacttctcccgtaaaggtgaaaag
agtctatcgtcagcgaccatagttcagggcgaggtgtatttcaccagttttgtgcctggt
agtgatgcttcggtgaaccaatgtttaagttcggggaagggctacctctataaaaagaat
ttacacaaaggcacgaatggctacagaaccgatttcttatatgccggtgaactggttttg
gatacgccgcaattggtcatccccccggcagcgcagcctgatgaccccaatgctaaggct
cccactctagatatgtttttgattgggattggtaaggcagtgcctgaggaggcgacttgt
gagagcggtaatcctaagtgtattggcagtgggcctaaggcaaataagatttactactac
gtagatcaataa
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