Shewanella sp. MR-4: Shewmr4_1094
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Entry
Shewmr4_1094 CDS
T00388
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
she
Shewanella sp. MR-4
Pathway
she00260
Glycine, serine and threonine metabolism
she00460
Cyanoamino acid metabolism
she00630
Glyoxylate and dicarboxylate metabolism
she00670
One carbon pool by folate
she00680
Methane metabolism
she01100
Metabolic pathways
she01110
Biosynthesis of secondary metabolites
she01120
Microbial metabolism in diverse environments
she01200
Carbon metabolism
she01230
Biosynthesis of amino acids
she01240
Biosynthesis of cofactors
she04981
Folate transport and metabolism
Module
she_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shewmr4_1094
09102 Energy metabolism
00680 Methane metabolism
Shewmr4_1094
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Shewmr4_1094
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Shewmr4_1094
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Shewmr4_1094
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Shewmr4_1094
Enzymes [BR:
she01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Shewmr4_1094
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ABI38174
UniProt:
Q0HL93
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All DBs
Position
1285675..1286928
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AA seq
417 aa
AA seq
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MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGRLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAADDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVKNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKELTGWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgttcaacgcaattcag
aacgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatgcaagcgcaaggttcacaattaaccaacaagtacgccgaaggttatcct
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcaattgag
cgtgcaaaacaactgtttggtgcgacttacgcaaacgtgcaacctcactcaggttctcaa
gcaaacagcgccgtttacatggcattgttaaaaccaggcgataccgttttaggtatgaac
ctcgctcacggtggtcacttgacccacggttcacctgtaaacttctccggtagactgtac
aacatcattccttacggcatcgatgaatcaggcaaaatcgactacgacgaaatggaacgt
ctggcagttgaacataagcctaagatgatgatcggtggtttctctgcttactcaggcatc
gttgactgggcaagaatgcgcgaaatcgcagacaaaatcggtgcttacctgtttgtcgac
atggcgcacgttgcgggtcttatcgccgctggtgtgtatccaaaccctgtgccacacgcg
cacgttgtgacctcaaccactcacaagaccttagccggtcctcgtggcggtatcattctg
tctgcagccgatgatgaagatttatacaaaaagctgaactctgcggtattcccaggcggt
caaggcggtcctttgatgcacgttatcgcaggtaaagcggtagccttcaaagaagcttta
gagccagagttcaaagcttaccaacaacaagtggttaagaacgctaaagctatggttgaa
gtgttcttagagcgcggttacaagatcgtttctggcggtactgacaaccacttaatgctg
gtggacttaatcggtcgcgacctgacgggtaaagaagccgatgccgctttaggtagcgcg
aacatcacagtaaacaaaaactctgtgcctaacgatccacgttctccattcgtgacctct
ggtgtgcgtattggtacgcctgcgatcactcgccgcggctttaaagaagctgaagcgaaa
gagttaaccggttggatctgtgacatcctcgacgatgcccacaacccagcagtcatcgag
cgcgtaaaaggccaagtattggcactgtgcgcccgtttccctgtttacggttaa
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