Shewanella sp. MR-4: Shewmr4_1119
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Entry
Shewmr4_1119 CDS
T00388
Name
(GenBank) Pseudouridylate synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
she03016
]
Shewmr4_1119
Enzymes [BR:
she01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Shewmr4_1119
Transfer RNA biogenesis [BR:
she03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Shewmr4_1119
Prokaryotic type
Shewmr4_1119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ABI38199
LinkDB
All DBs
Position
1313534..1314661
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AA seq
375 aa
AA seq
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MSELHYLYGKPTGTADLRTVNSDFIVKEILPFSPSGEGEHHLVHIRKDGLNTVQVAEMLA
KFAKVHPKEVTYAGQKDKNAITEQWFGIRIPGKETPAWSELNSERLTILSSSRHSKKLRI
GALLGNRFILTLRNVTNVEDIINRIEKVSQIGVPNYFGEQRFGHDGKNLVMGRQMLAGKK
VKDRNKRSMYLSAVRSNLFNTVVSYRLANHGTKPLAGDCVMLAGSKSFFVTPEWDLVVLK
RLIEKDIQLSAPLWGRGKMLPQGEAAEVETLAMAALSEDCYGLEHAGLEQERRPLLLEPQ
GLKFEQTADGLVLEFILPAGSFATSLLRELVDYQDVKELQWQATVSPDANAPEANLATES
DVAEVSSTDNGESAL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactacattacctgtacggcaaaccgacgggcaccgcagatttaagaaccgtt
aacagcgactttatcgtgaaagagattttgccttttagcccgtcgggcgagggcgagcat
catttagtccacattcgtaaggatgggctgaatacggtacaagtggctgaaatgctggcg
aagttcgctaaggttcatcccaaagaggtgacctatgccggacaaaaagataaaaatgcc
attacagaacagtggtttggcattcgtattccaggtaaagaaacccctgcgtggagcgag
ctaaacagcgagcgtttaaccattttatccagtagtcgccacagcaaaaaactacgtatt
ggcgcgcttttgggcaaccgttttattcttaccctgcgcaatgtcaccaatgtggaagac
attatcaaccgtatcgaaaaggtcagccaaattggtgtgcccaattattttggtgagcag
cgtttcggtcatgatggtaaaaacctagtgatgggacggcaaatgctggcgggcaaaaag
gtgaaagaccgtaataagcgcagcatgtatctgtctgcggtgcgctccaatctgttcaat
accgttgtctcctatcgtttggcgaatcatggcactaaacccttagcgggggattgcgtg
atgctagcaggcagtaagagctttttcgtcacgccagaatgggatttagtggtattaaag
cgtttgattgagaaagatattcagctttctgccccactttgggggcgtggaaaaatgctg
ccgcagggtgaagccgccgaggttgaaaccctcgccatggcagcgctgagcgaagattgc
tacggccttgagcacgcggggcttgagcaggagcgtcgtccattgctgctcgaacctcaa
ggccttaagttcgagcaaactgcggatggactggtgctcgagtttatcttacctgcgggc
agttttgcgacatcgctgttaagagaactggttgattatcaagatgtgaaagagctgcaa
tggcaagcgacagtctcacctgatgctaatgctcctgaggccaatctcgccactgaaagt
gatgtggctgaggtcagttcaacagataatggcgagtccgctttatga
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