Shewanella sp. MR-4: Shewmr4_1165
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Entry
Shewmr4_1165 CDS
T00388
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
she03400
]
Shewmr4_1165
Enzymes [BR:
she01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Shewmr4_1165
DNA repair and recombination proteins [BR:
she03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Shewmr4_1165
Prokaryotic type
Shewmr4_1165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABI38245
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Position
1371647..1373128
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AA seq
493 aa
AA seq
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MSDNQPQAAKHTLMWFRQDLRLTDNQALTAACDWVRQVPGAKLRAIYIATPSQWLSHDMA
PIQIDFIQRHVNLLAQGLASLGIEFELIQLDSFKEVPAFLASYCEKLGVERVFAGREPEI
NEQKRDQACLDVGIPLVLSDEHCLLPPGTVLNLSGDMYKVFTPFSRKWREVAAKRAILPL
AVPAPLGPMLPEPKPISFKERFPFTSKLTSSEQWAAGEGQAKRILTAFIQQKAQDYKQDR
DFPALEGTSVISPYLALGVLSPRQCIAALLGRFPEVIVDDTSPGRTWLNELIWREFYRHL
LVAFPDLSKGHNFNRQADHVQWRNNQAEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLR
MVVASFLTKHLLIDWRWGERYFRQHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPISQ
SEKFDPDGSFIRKYLPELASWGIKRLHQPNMQKTPSLFEVPTLESDSAYPYAIVEHNAAR
ARALAVLGVLKKA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataatcaaccccaagcggcaaagcacacgttgatgtggtttcgccaggatctg
cgcctaacggataaccaagcactgacggcagcctgtgattgggtgcggcaagtgcctggc
gcaaaactcagggcgatttatattgcgactccgagccaatggctcagccacgatatggcg
ccgatccagattgattttatccagcggcatgtgaatttgctcgctcaaggactcgcaagc
ctagggattgaatttgagcttattcaacttgatagctttaaagaagtgcccgccttttta
gcgagttactgtgaaaagcttggagttgagcgggtgttcgcggggcgagaacccgaaatc
aacgagcaaaagcgcgaccaagcctgtctcgatgtgggtattcccttggtgctcagcgac
gagcattgcctattaccgccgggcacagtgcttaacttaagcggtgatatgtataaggtg
ttcacgccctttagccgcaagtggcgagaagttgccgccaagcgcgccattttgccgctt
gctgtacctgcgccgcttggccctatgttacctgaaccaaagccaatcagttttaaagaa
cgtttcccattcactagcaagctaacctctagcgagcaatgggcggcgggagaggggcag
gcaaaacgtattcttaccgcatttattcagcaaaaagcccaagactataaacaggatagg
gactttcctgctctcgagggtaccagtgttatctccccttatttggcgctgggtgtgctg
agtccaaggcaatgtattgcggcgctgcttgggcgttttcccgaggtaattgtcgatgat
actagccctgggcgaacctggttgaatgagctgatctggcgggagttttatcgccatttg
ttagtggcttttccagatttatccaaggggcataactttaatcgtcaggccgaccatgtg
cagtggcgcaacaaccaagctgagtttttggcatggtgcgagggcaaaacgggttacccg
attgtagatgcggcaatgcgccagcttaatcaaactggctggatgcacaatcgactgcgc
atggtggtggcgagctttttaaccaaacacttgcttatcgattggcgctggggtgaacgt
tacttccggcagcatcttatcgacggcgatctggcggctaataacggtggctggcaatgg
tcggcgggctgtggctgcgatgcccagccttatttccgcatttttaatcctatcagccag
agcgaaaagtttgatccagatggcagctttatccgtaagtacttaccagagctggcatct
tggggaatcaagcgtttgcaccaacccaatatgcaaaaaacgccttcgttatttgaggtg
ccaacgctggagtctgactcggcttatccctatgcaattgtggagcacaatgcggcaagg
gcgagggcgctagcggtacttggggtgctgaaaaaggcctag
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