Shewanella sp. MR-4: Shewmr4_1237
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Entry
Shewmr4_1237 CDS
T00388
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
she01011
]
Shewmr4_1237
Enzymes [BR:
she01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Shewmr4_1237
Peptidoglycan biosynthesis and degradation proteins [BR:
she01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Shewmr4_1237
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Phosphonate-bd
LysR_substrate
Lysozyme_like
Lysis_col
Motif
Other DBs
NCBI-ProteinID:
ABI38317
UniProt:
Q0HKV0
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All DBs
Position
complement(1439888..1441324)
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AA seq
478 aa
AA seq
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MTRFLFAIILGFLLTACQQVTVEETEYVPHKLTELRVGTLYGPQIYMTSGQGNSGFDYDM
AVLFAEYLDVPLKMVPYTNRAELYEALKKNEIDIIAAGMTETPARREQFRLGPPLYRVNQ
VLVYREGMPTPKDITDLKGKITVIADSSFVETLTQLQKRHPTLVWDQVTDKDSEELLAMI
ANKEIDYTIADSSSVQINRRYLPDLRSGLVLEEKLDVVWLLPPTHSDGLMSQLLAFWHQE
KLAGTLDHLNEKYFGHVKRFDYIDTRAFLRAIETVLPRYRQLFETHAGDLDWRKLAATSY
QESHWNPNARSPTGVRGMMMLTQPTAKEIGITNRLDAEESIRGGAAYLRDMINRLPESIP
ESQRMWFALASYNIGYAHVEDARKLAESMELNPNAWRDLKKVLPLLQKRKYYQKTRYGYA
RGSEAVHYVDSIRRYYDTLVWVDNQSKQQNSDEEEPSDLASEDGPAPVPGTLSPDKPK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatttctgttcgcgattatcttaggtttcttactgacggcgtgtcagcaagtg
accgtggaagaaacagaatatgttccccataaactcaccgaattaagggtcggcaccctt
tatggcccgcaaatttatatgacctcgggccaaggtaacagcggcttcgattacgatatg
gcggtgctctttgccgagtatctcgatgtgcccttaaaaatggtgccctacaccaaccgc
gccgaactctatgaagcattgaaaaaaaacgagattgatatcattgccgcggggatgaca
gaaacccctgcgcggcgcgaacaattccgtttaggcccgccgctgtatcgcgtcaatcaa
gtactggtttaccgtgaaggcatgccaacacccaaagacatcacagatttaaaaggcaaa
attaccgtaattgccgactcttcttttgtggaaaccttgacgcaattacagaaacgccat
ccgacgctggtgtgggatcaagtcacagataaagacagcgaagagctgctagcgatgatc
gccaacaaggaaatcgactacaccatcgccgactcgagcagcgtgcagattaaccgccgt
tacttaccggatctgcgttcagggctcgtgctagaagaaaagctcgatgtggtttggtta
cttccccccacacacagtgacggtttgatgagtcagttattggcgttttggcaccaagaa
aaactcgccggcacactcgatcacttaaacgaaaagtactttggccacgttaagcgtttc
gactatatcgatacccgcgccttcctacgtgccatcgaaactgtgctgccgcgttatcgt
cagcttttcgaaacccacgccggagacttagattggcgaaaattagcggcgaccagttat
caagaatcccattggaatcctaatgcccgctcgccgactggggtgcgcggcatgatgatg
cttacacagccaaccgccaaagaaattggcattacgaaccgcctcgatgcggaagagagt
attcgcggcggcgccgcttatttacgggatatgatcaaccgtctgcccgagtctatcccc
gagagtcaacgcatgtggtttgcgctggcctcttacaatatcggttatgcccatgtggaa
gatgcgcgtaagctcgccgagtccatggagcttaatcccaacgcctggcgggatcttaaa
aaggtattgccactgctgcaaaagcgtaaatattaccaaaagacccgttatggctatgcc
cgtggtagcgaagccgtgcattacgtcgacagcattcgccgctattacgacaccttagtc
tgggtcgataatcaatctaaacaacaaaatagcgatgaggaagaaccgagcgacctcgcc
tcggaagatggcccagcgccagtgcccggcaccctcagcccagataagccgaaatag
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