Shewanella sp. MR-4: Shewmr4_1363
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Entry
Shewmr4_1363 CDS
T00388
Name
(GenBank) TRAP dicarboxylate transporter, DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
she
Shewanella sp. MR-4
Pathway
she02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
she00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shewmr4_1363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_1363
Transporters [BR:
she02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shewmr4_1363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
KRE1
Motif
Other DBs
NCBI-ProteinID:
ABI38441
LinkDB
All DBs
Position
complement(1585890..1586912)
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AA seq
340 aa
AA seq
DB search
MTLNQQMGITRPLKTVAKMLALASVFATSFNVFAAPVEIKFSHVVAENTPKGQMALKFKE
LVEQRLPGEYTVSVFPNSQLFGDNNELAALLLNDVQFVAPSLSKFERYTKRLQVFDLPFL
FNDMDAVNRFQQGEAGQALLNSMSRKGIVGLGYLHNGMKQFSANTPLKQPSDAKGLKFRV
MASDVLAAQFDAVGAIPVKKPFSEVFTLLQTRAIDGQENTWSNTYSQKFYEVQSQITESN
HGVLDYMVVTSDAFWKGLPADKRKVIKEALDESIALGNKIAAEKDNEDKQLILDSKRSQL
VTLTPEERQKWIDVMKPVWAKFEDQVGKDVIEAAVAANKQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacattgaatcaacagatgggtattacacgtccattgaaaaccgtcgcaaaaatgctg
gcactggcctcagtgtttgcgaccagctttaacgtgtttgcggcgcccgttgaaatcaag
ttctcccacgtggttgctgaaaacacgccaaagggtcaaatggcgttgaagtttaaagaa
ttagttgaacaacgtttacctggtgaatatacggtcagtgtattccctaactcacagtta
tttggggataacaacgagttagcggcacttctgttaaacgacgtgcaatttgtagcgcct
tctctttctaaatttgagcgttacactaagcgcctacaggttttcgacctgccattcctg
ttcaatgacatggatgcagtaaaccgtttccaacaaggtgaagccggccaagccctgctg
aactcaatgagccgtaaagggattgtgggtttaggttatctgcacaatggtatgaagcag
ttctctgctaacactccactcaaacaaccttctgatgctaaaggcttaaaattccgcgtg
atggcatctgacgtattggctgcccagtttgatgcagttggcgccatcccagtgaaaaaa
cctttctctgaagtgttcactctgctgcaaacccgtgcgatcgacggtcaagaaaatact
tggtcaaacacctactcacaaaaattctatgaagttcaaagccagattactgaaagtaac
cacggcgttctggactacatggtcgtgacctctgacgccttctggaaaggcttacccgcg
gataaacgtaaagtgatcaaagaagcgttagatgagtctatcgccttaggtaacaagatc
gctgctgaaaaagataacgaagacaagcaattaatccttgattctaaacgttctcaactg
gtgaccttaacaccagaagaacgtcaaaaatggattgatgtaatgaaacctgtttgggcg
aaatttgaagaccaagtaggtaaagatgtgattgaagccgctgttgctgcaaataaacaa
taa
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