Shewanella sp. MR-4: Shewmr4_1402
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Entry
Shewmr4_1402 CDS
T00388
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
KO
K07114
Ca-activated chloride channel homolog
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_1402
Transporters [BR:
she02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr4_1402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_16
TPR_11
TPR_14
TPR_7
TPR_6
TPR_8
TPR_12
TPR_9
Motif
Other DBs
NCBI-ProteinID:
ABI38480
LinkDB
All DBs
Position
complement(1632436..1634481)
Genome browser
AA seq
681 aa
AA seq
DB search
MSLHFIRPEWLLALLPLAIILWALWRQHQSNSAWNRYIAPHLAKILVTEGTQKSRRPLHI
LAFTWVIATLALAGPALNKQTLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQTKFRATD
LLRGLKEGETGLIAFAGDAFTISPLTRDTGTLLNLLPTLSPDIMPVLGSNLAAALTQAKN
LLAQGGHLRGDIIVMTDGITPRQFDEANSALAGSQYRLAIMGFGSPQGAPIRLPDGQLQR
DSSNEVVVAKTDFGLLQKLADNHNGIMIPNRADGQDLAQLQHWLSDSGDAKATDLDGETW
QDLGPYLALLLLIPALLSFRQGMLANWLLMGLGGLLLSAAPQSAHASAWDSLWHTQEQQA
MQAYQAEDYANAAQKFETPQWQGAAQYKAGEYEQALKSFEQDSSANGLYNQGNALMQLGK
PDKAKERYQAALDKQPEFPQAKANLELAEKLLNQQQSQQNADNQDKQSQGDQNQQGQDQN
DQQQGDQQSSQNDQAQDQSQEQQSQQQNNSDQADKKPSQEQSTSSEQNDPEQGAQDKQQA
SDENAKQDQQDAQQEQQQAEQQANQQNGADNNAEDKEDPASNEAKMQAKVEDDKSKAKQE
QQQAVAQKADKEKQAQADKKPDTAVESVEAPPSNSEPLPAEMQRALRGVSEDPQVLLRNK
MQLEYQKRRQNGQISRDNEQW
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcattttattcgtccagaatggttactcgccctgttgccactcgccatcatc
ctgtgggcgctatggcgccaacaccagagtaacagtgcttggaatcgctatattgcgccg
cacttggccaaaatattggtcacagagggcacgcaaaaatcccgtcgaccattgcatatc
ttggctttcacttgggtgattgccaccttagccttagcgggccccgccctcaataagcaa
accttgccggtttttgccgccgagcaaggccgagtgttggtgatggatatgtctgtctcc
atgtttgccaccgatctggcgcccaaccgcttaacccaaaccaagtttcgggcgacggat
ttgctccgcggcttaaaagaaggcgaaaccggcctgattgccttcgctggcgatgccttt
accataagcccgctcacccgagacacgggcacgctgcttaatttattacccacgttaagc
cctgacattatgcccgtgttgggctcaaacctagcggccgcgctaacccaagctaaaaat
ctactggcacagggcgggcatctacggggcgatattattgtgatgacagatggcatcacc
ccgaggcaattcgatgaggctaactctgccttagccggtagccaatatcgcctcgcgatc
atgggatttggtagcccccaaggcgcgcccatccgcttacccgatggccaattacagcgt
gacagcagcaatgaagtcgttgtcgccaaaaccgactttggcttactgcaaaaattagcc
gataaccataatggcatcatgatccccaatcgtgccgatggtcaggatttagcacagttg
caacattggttgagtgacagtggcgatgccaaagccacggatctcgatggagaaacctgg
caagatctcggcccttacctcgccttactcttactcatccctgccctgctgagctttagg
caaggcatgctcgctaactggctgctgatgggattgggcggtctattgctcagcgctgcg
ccgcaaagcgcccatgccagcgcatgggactcactctggcacacccaagagcaacaggcg
atgcaggcctatcaagctgaggattacgccaatgccgcacaaaaattcgagacgccccaa
tggcaaggcgcggcgcagtacaaggcgggcgagtacgaacaggcgctaaaaagctttgag
caagatagctctgccaatggcctttacaaccaaggcaacgcgctgatgcaactcggtaaa
cccgacaaagccaaggagcgttatcaggccgcactcgacaagcagcccgagtttccacag
gccaaggccaaccttgagttagcagagaaattgctgaaccagcagcagtcgcagcaaaat
gctgacaatcaagataaacagtctcaaggcgatcaaaaccaacagggacaggaccagaac
gatcagcagcagggagatcaacaatcctcgcaaaacgaccaagctcaagatcagtctcaa
gagcagcagtcccaacagcaaaataattctgatcaagcggacaaaaaaccatcgcaggag
caaagtacctcatcagagcagaatgatcctgagcaaggcgcgcaggataaacagcaagcg
agtgatgaaaacgccaagcaagatcagcaagatgcacagcaggaacaacagcaggccgag
caacaagccaatcagcaaaacggcgccgataacaatgctgaagataaagaagatccagcc
agcaacgaggcaaaaatgcaggcaaaggtcgaggatgataagtccaaagccaagcaagaa
cagcaacaggccgtagcgcaaaaagcggataaagagaaacaggcgcaggcggataaaaaa
ccagataccgctgttgagtctgttgaagcgccgccgagtaacagcgagcctttacccgcg
gagatgcagcgagcactgcggggcgtgagtgaagatccacaggtgttactgcgtaacaag
atgcaactcgaatatcaaaaacgccgtcaaaatggccaaatatcaagggataacgaacag
tggtga
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