Shewanella sp. MR-4: Shewmr4_1426
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Entry
Shewmr4_1426 CDS
T00388
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
she03016
]
Shewmr4_1426
Enzymes [BR:
she01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Shewmr4_1426
Transfer RNA biogenesis [BR:
she03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Shewmr4_1426
Prokaryotic type
Shewmr4_1426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ArgoL1
Motif
Other DBs
NCBI-ProteinID:
ABI38504
UniProt:
Q0HKB3
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All DBs
Position
1667524..1668309
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AA seq
261 aa
AA seq
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MRIALGIEYDGSGYFGWQRQAEVDSVQGQLEQALSKVANEPISLFCAGRTDAGVHATGQV
VHFETNAIRNEGAWTLGVNANLPDNIAVRWAKEVDDSFHARFSATARRYRYVIYNHNFRP
GILRHGVSHYHGDIDADKMHVAAQALLGEQDFTSFRAVQCQSKTPFRNVHSVKVTRQGMY
VIVDISANAFLHHMVRNIVGSLLEIGLGNQPLTWMADLLALKDRNQAAATAKPNGLYLVD
VTYPEQYQLPKLALGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcattaggtattgaatatgacggaagtggttatttcggttggcagcgtcag
gccgaagtcgattcagtacaagggcaattagaacaagccttatctaaggtggcgaatgaa
cccatcagcttgttctgtgcggggcgaaccgatgccggcgttcatgcgactgggcaggtg
gtgcatttcgagactaacgccatacgcaacgaaggcgcctggaccttaggggtgaatgcc
aatttacccgataatatcgccgttcgttgggctaaagaggtggatgacagtttccatgcc
cgcttttcagccacggccagacgttatcgctatgtgatttacaatcataattttcgcccc
gggatcctacgtcacggcgtgagccattaccacggtgatatcgacgctgataaaatgcat
gttgcagcgcaggcgctgctcggtgagcaggactttaccagttttcgtgccgtccaatgc
caatcgaaaaccccgtttcgcaatgtgcacagcgtcaaagtgacgcgtcagggcatgtat
gtgattgtcgatatttctgccaacgccttcttgcaccatatggtgcgaaacattgtcggc
tccctgctggaaattggcctaggcaaccagccgctgacttggatggcggatttactggcc
cttaaagaccgaaatcaagcggcggccaccgccaaacccaatggactctatttagtcgat
gtgacctatcccgagcagtatcaactgccgaagttggctttagggccattgtttatgctg
gattaa
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