Shewanella sp. MR-4: Shewmr4_1606
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Entry
Shewmr4_1606 CDS
T00388
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
she
Shewanella sp. MR-4
Pathway
she00020
Citrate cycle (TCA cycle)
she00480
Glutathione metabolism
she00720
Other carbon fixation pathways
she01100
Metabolic pathways
she01110
Biosynthesis of secondary metabolites
she01120
Microbial metabolism in diverse environments
she01200
Carbon metabolism
she01210
2-Oxocarboxylic acid metabolism
she01230
Biosynthesis of amino acids
she04146
Peroxisome
Module
she_M00009
Citrate cycle (TCA cycle, Krebs cycle)
she_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Shewmr4_1606
09102 Energy metabolism
00720 Other carbon fixation pathways
Shewmr4_1606
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Shewmr4_1606
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Shewmr4_1606
Enzymes [BR:
she01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Shewmr4_1606
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Gene cluster
GFIT
Motif
Pfam:
IDH
HTH_39
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
ABI38683
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All DBs
Position
1901329..1903554
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AA seq
741 aa
AA seq
DB search
MKDNSPTIIYTETDEAPALATLSLLPIIKTFTDAAGVAVETRDISLSGRVIANFPEKLTD
AQKIGDHLAELGELANQPEANIIKLPNISASIPQLKACILELQQKGYDIPNYPDEPKTDE
EKSIKARYDKIKGSAVNPVLREGNSDRRAPLSVKNFAKKNPHSMGKWSKESQSHVAHMSE
GDFYGSEQSVTLANADTVNIVLSQKDGQDVVLKSGLKLLAGEIIDASVMSKKALVSFFER
EISNAKAENVLLSLHLKATMMKVSDPIMFGHAVKVFFKPVFDKHASLFAELGVDVNNGFG
DVYAKIAGLPADVRAQIEADIAAVYAERPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGKLHDTKALIPDRCYAGVYQETIAFCKEHGAFDPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIPADGVVNVIDASGKVLMSHNVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDANRAHDAQLIAKVKQYLPEHDTSGLEISIMSPEEATRFSLVRIKEGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTVGNPKAQVLADTLDQAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQSKDEQLQAHFIPLAHALAANEQVIVAELNNAQGAPVDLGGYYRL
DAAKAEKAMRPSETLNKLLIA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataactcaccaacaattatttataccgaaaccgatgaagcgccagcactggca
acgctttctctgttacctatcatcaaaacctttaccgatgcggcgggtgttgcggttgaa
acccgtgatatttctttatcgggccgtgtgattgcaaatttccctgaaaaactgactgac
gcgcaaaaaattggcgatcacttagctgagctgggcgaattagccaatcaacctgaagca
aacatcatcaaactgccaaacatcagtgcctcgattccgcagttaaaagcctgtatttta
gagctgcaacagaaaggttacgacattccaaattatcctgacgagccaaagactgacgaa
gaaaagtctatcaaagcccgttacgacaagatcaaaggcagtgcggtaaacccagtactg
cgtgaaggtaactctgatcgccgcgcgccgctttcagtgaaaaacttcgccaagaaaaac
ccgcactctatgggtaaatggagtaaagagtcacaatctcacgttgctcacatgagcgaa
ggtgacttctacggtagcgagcagtctgtgactctggctaacgccgacacagttaacatc
gtattgtcgcaaaaagacggtcaagacgtggtattgaaatctggcctgaaactgctagct
ggtgagatcatcgacgcgtcagtgatgagcaaaaaagccttagtgagcttctttgagcgt
gaaatctccaatgccaaggccgaaaacgtgttgttatcactgcaccttaaagccaccatg
atgaaagtgtctgatcccattatgttcggccacgcagtgaaagtgttcttcaaacctgtg
tttgataaacatgcgtcattatttgctgagctaggcgttgatgtgaacaacggctttggc
gatgtatacgccaaaatcgctggtttacccgccgatgtccgtgcacaaattgaagccgat
atcgctgctgtttatgctgagcgcccagcgctggcgatggtggattctgataaaggcatc
accaacttacacgtaccaagcgacatcattatcgatgcttctatgcctgcggcgattcgt
tcatcaggccaaatgtggggccctgatggcaagttgcacgacactaaagcgctgatccca
gaccgttgctacgcgggtgtgtatcaagaaactatcgctttctgtaaagaacacggagcc
ttcgatccaagcactatgggcagtgtgccaaacgttggtctgatggcgcaaaaagccgaa
gaatacggtagccacgataaaaccttcgaaatcccagccgatggcgtagttaacgtgatt
gatgccagtggcaaagtgttaatgagccacaacgttgaagcgggcgatatttggagaatg
tgccaagttaaagatgcgccaattcgcgactgggtgaaattagctgtacgccgtgcacgc
ttaagcaatactcctgcggtattctggttagatgcgaatcgtgcccacgatgcgcagctg
attgctaaagtgaagcaatatctgcctgagcatgatacaagcggtttagaaatcagcatc
atgtcaccagaagaagcgactcgtttctcattagtgcgtattaaagaaggtaaagatact
atttctgttaccggtaacgtactgcgtgactacctgactgacttattcccaattctcgaa
ctgggtaccagtgctaagatgctgtctatcgtgccattaatgaatggtggcggcctgttc
gaaacgggtgcgggcggtagtgcgcctaaacacgtacaacaggttgaaaaagaaggtcac
ttacgttgggactctctgggtgaattcctggctttagcggcttctttagagcatttaagc
caaacagtgggtaaccctaaggcacaagtactggcggatactttagatcaagccatcggt
cagttcttagatagcaataagtcgccatcaagacgcgttggtgaactagataaccgtggt
agccatttctatctggcgatgtactgggcacaagcattagctgcacaaagcaaagacgag
cagttacaagctcactttattccactggctcacgcactagctgccaatgagcaagtgatt
gttgctgagttaaacaatgcgcaaggtgcaccagtggatttaggcggttactaccgttta
gatgctgcaaaagctgaaaaagccatgcgcccaagtgaaacactgaacaagttattaatt
gcttaa
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