Shewanella sp. MR-4: Shewmr4_1655
Help
Entry
Shewmr4_1655 CDS
T00388
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
she
Shewanella sp. MR-4
Pathway
she00450
Selenocompound metabolism
she00970
Aminoacyl-tRNA biosynthesis
she01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Shewmr4_1655
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shewmr4_1655
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
she01007
]
Shewmr4_1655
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
she03016
]
Shewmr4_1655
Enzymes [BR:
she01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
Shewmr4_1655
Amino acid related enzymes [BR:
she01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Shewmr4_1655
Transfer RNA biogenesis [BR:
she03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Shewmr4_1655
Prokaryotic type
Other AARSs
Shewmr4_1655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Adenyl_transf
Motif
Other DBs
NCBI-ProteinID:
ABI38731
UniProt:
Q0HJN6
LinkDB
All DBs
Position
complement(1955161..1957191)
Genome browser
AA seq
676 aa
AA seq
DB search
MATSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIM
LKAQQLGMAPEEMIAQVNKEHQQDFADFNIAFDNYHSTHSEENRVLASDIYLKLRANGYI
KSKSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSG
ATPVMKDTEHFFFDLPAFEDMLKEWTRSGALQTEMANKLDEWFEQGLQQWDITRDAPYFG
FEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVYF
HSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYA
AKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDAF
LAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQEVAHQVCSNAL
NLFRILVTYLKPVLPRLAQDVEAFFQQTLTWDGLGQDMAGHEIAPFKAMMQRVEFDKVEA
MVADSKENLQATSEPEAPKGPLATDPISDTINFDDFAKIDLRIARIVKAEHVAEADKLLK
LQLDIGGETRQVFAGIKSAYSPEDLEGKLTVMVANLAPRKMRFGMSEGMVLAAGPGGSDL
WILEPHEGAQPGMRVK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcacaacgtaaaattctcgtgaccagcgcacttccctacgcgaacggaccg
attcatttaggtcacatgctggaatacatccagacggatatctggtcgcgttatcaaaag
cttcgtggacatgagtgccactatatttgtgccgatgacgcccacggcacaccgattatg
ctcaaggcgcagcaattaggcatggcgcctgaagaaatgatcgcgcaagtcaacaaagag
catcagcaggattttgccgattttaatatcgccttcgataattatcacagcacccacagt
gaagaaaaccgcgtgctggcgagcgatatttacttaaaactgcgcgctaatggctatatc
aagagcaagagcatttcgcagttatttgaccctgaaaagtcgatgttcctgccagaccgc
ttcgtaaaaggcacctgccctaagtgtaaatcaccggatcaatacggcgacaactgcgat
gcctgcggcgcaacttacagcccaactgagctgattaaccctaagtcggccgtctctggt
gcgacaccagtgatgaaggacactgagcacttcttcttcgacttacccgctttcgaagac
atgctcaaagagtggactcgttcgggtgcactgcaaaccgaaatggccaacaaactcgat
gaatggttcgaacagggtctgcagcaatgggacatcacccgcgatgcgccttactttggt
tttgagatccctgatgcaccgggcaaatacttctacgtatggttagatgcgcctatcggc
tacatgggctcattcaaaaacctctgtgacaaacgcccagagctgagcttcgacgaattt
tgggccaaggattctaaggccgaggtttaccactttatcggtaaagacatcgtttacttc
cacagcctgttctggcccgccatgctccatggctcgggctaccgtcaacctaacagtgtc
tacgcccacggttatgtcacagtgaacggcgctaagatgtctaaatctaagggcaccttt
attaaggcgcgcacctatttagaccacttagatcctgaatatttacgctactactacgcg
gccaaactcagtagccgtatcgacgatttagatttaaatctggaagatttcgcccagcgc
gtgaattcagatctagttggtaagctagtgaacttagcctcgcgcaccgcaggttttatc
actaagcgtttcgatggcaagttggccaagattgccgacaccacactcacggatgcgttt
ttagcgaaacaagagcaaatcgccgagttttatgaaacccgcgaatacggtaaagcgatg
cgcgaaatcatggcgctagccgatatcgccaacggttttgtcgccgatgcggcgccttgg
cagttagtgaagcaagatgatcaacaggaagtggcgcaccaagtgtgttcaaacgccctg
aacctgttccgcattttggtgacttacttaaagcctgtgttaccacgcttagcacaagac
gttgaagccttcttccaacaaaccttaacttgggatggcttaggacaagatatggcgggc
cacgaaattgcgccattcaaagccatgatgcaacgtgttgagttcgacaaagttgaagct
atggtggccgactctaaagaaaacctgcaagccacgagcgagcctgaagcgcctaagggc
ccattggcgaccgatcccattagcgacaccatcaactttgatgatttcgcgaaaatcgat
ctgcgtattgcgcgtatcgttaaagccgagcatgtggccgaagccgacaaactgttgaaa
ctgcaattggatatcggcggcgaaacccgtcaggtatttgcgggcattaaatcggcctac
tcgcctgaggatctcgaaggtaagctaacggtgatggtcgccaaccttgcaccgcgtaag
atgcgttttggcatgtcagaaggcatggtactggccgcaggccctggtggcagcgatttg
tggattctagaaccccatgaaggcgcacaacctggcatgcgtgtgaagtaa
DBGET
integrated database retrieval system
