Shewanella sp. MR-4: Shewmr4_1857
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Entry
Shewmr4_1857 CDS
T00388
Name
(GenBank) succinyldiaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
she
Shewanella sp. MR-4
Pathway
she00300
Lysine biosynthesis
she01100
Metabolic pathways
she01120
Microbial metabolism in diverse environments
she01230
Biosynthesis of amino acids
Module
she_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Shewmr4_1857
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
she01002
]
Shewmr4_1857
Enzymes [BR:
she01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Shewmr4_1857
Peptidases and inhibitors [BR:
she01002
]
Metallo peptidases
Family M20
Shewmr4_1857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ABI38931
UniProt:
Q0HJ36
LinkDB
All DBs
Position
complement(2205418..2206563)
Genome browser
AA seq
381 aa
AA seq
DB search
MTHASNSHPVTELTKELIARPSVTPLDEGCQTLMAERLAAIGFNIEPMVFEDTTNMWARR
GNEGPVFCFAGHTDVVPAGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMIVATERF
VAKHPNHPGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPSSTLKLGDVVK
NGRRGSLTANLTVKGIQGHVAYPHLADNPIHKAAPFLAELSQTHWDNGNEFFPPTSMQIA
NINGGTGASNVIPGTLEVMFNFRYSTEVTAEILIERVEALLTAHELDYDISWTFNGLPFL
TGEGPLLDATRHAIRQITGYDTDPQTTGGTSDGRFIAPTGAKVLELGPVNATIHKVNECV
KIDDLEQLALCYEVILEQLLC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgcttcgaacagccacccagttaccgaactgactaaagaattaattgcccgt
ccttcggtcaccccactggatgaaggctgccaaaccctgatggccgaacgtcttgccgcc
attggctttaatattgagcccatggtctttgaagacaccaccaatatgtgggcgcgtcgc
ggtaatgaaggcccagtattttgttttgccggccataccgatgtagtgcccgcgggcgat
ttaagccgctggcataccccgccttttgagccaaccattatcgacggttacctctatggc
cgcggcgcggcagacatgaaaggctcgctggcggcgatgatcgtcgcgaccgaacgtttt
gtggctaagcacccaaatcatcccggctcgattgcgtttttaatcactagcgatgaagaa
ggcccatttatcaatggcaccacacgggttatcgataccctagaagcccgtaatgaaaaa
atcacttgggcgctggtgggcgaaccctcatcgaccctaaaactcggtgatgtggtcaaa
aatgggcgccgtggcagcctgaccgccaacctaaccgtgaagggcattcagggccatgta
gcctatccgcaccttgcggataacccaatccacaaagccgcgccgtttttagccgagtta
agccaaacccattgggataatggcaacgaattcttcccgcccaccagcatgcaaatcgcc
aatattaatggcggcacgggcgcatcgaacgtgatcccaggcaccctagaggtgatgttt
aacttccgttattcgaccgaagtgaccgccgagatattaatcgagcgtgtggaagcccta
ttaaccgcccacgaactggattatgacatcagctggaccttcaacggcctgccattttta
accggcgaaggcccactgttagacgcgactcgacatgctatacgtcagatcactggctat
gataccgatccgcaaaccacgggcggcacctctgatggacgctttattgcaccaacgggc
gccaaagtgttggaactcggtccagtgaacgccactatccataaagtgaacgagtgcgtg
aaaatcgacgatctcgagcagttagccctgtgctacgaagtgattttggaacagttactg
tgttaa
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