Shewanella sp. MR-4: Shewmr4_1898
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Entry
Shewmr4_1898 CDS
T00388
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
she
Shewanella sp. MR-4
Pathway
she00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
she00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shewmr4_1898
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
she01007
]
Shewmr4_1898
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
she03016
]
Shewmr4_1898
03029 Mitochondrial biogenesis [BR:
she03029
]
Shewmr4_1898
Enzymes [BR:
she01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Shewmr4_1898
Amino acid related enzymes [BR:
she01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Shewmr4_1898
Transfer RNA biogenesis [BR:
she03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Shewmr4_1898
Prokaryotic type
Other AARSs
Shewmr4_1898
Mitochondrial biogenesis [BR:
she03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Shewmr4_1898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABI38972
UniProt:
Q0HIZ5
LinkDB
All DBs
Position
2261738..2263513
Genome browser
AA seq
591 aa
AA seq
DB search
MRSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVA
STLRAEFCVQVKGLVRARPNSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSE
EQRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MTSEQVMAKTEEMMRGLFLEMLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELVDVADL
LKEVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLNDLT
QGLEGIQSPVLKFLNEDIVNEIISRTGAQTGDIILFGADNATVVAESMGALRLKAGEDFN
LLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYDMVLNG
CELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGLDRIIM
LMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAKTED
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggagacgtcaataagtctcacgttggacaagaagttaccttg
gtaggttgggttaatcgtagccgtgatttgggtggcgtggtctttttagatttaagagac
agagaaggtctggtccaagtggtttacgatccagatttacctgaggtctttaatgttgcc
agtacgctgcgcgccgagttttgtgttcaggtcaaaggtctcgtgcgtgcccgtcctaat
agccaagttaacgcgcaaatgaagaccggcgaaattgaagtattaggtaaagaactgacg
atcatcaatagttctgagccgctgccgctgagcttagataactatcaaaacaacagtgaa
gagcagcgtctaaagtaccgttatttagatttacgtcgcccagaaatggcgcagcgctta
atgttccgcgcgaaagtgaccagtgctgtgcgtcgtttcctcgactcaaacggcttctta
gatatcgaaacgcctattctgactaaggcgacgccagaaggtgcacgtgactatttagtg
ccaagccgcacttacaaaggtcaattcttcgcgctgccacaatcaccacagctgtttaaa
cagttactgatgatgtcaggctttgatcgttactatcaaatcgtaaaatgcttccgtgac
gaagacttacgtgctgaccgtcagccagaatttactcaaatcgatatcgaaacttcattt
atgacgtctgagcaggtgatggctaagaccgaagaaatgatgcgtggtctgttccttgag
atgctgaacgtcgatttaggcgaattcccacgtatgacctataacgaagccatgcgtcgt
ttcggttcagataagcctgatttacgtaacccattagaactggttgacgtagctgacttg
ctcaaagaagtggagtttgcggtattctcaggcccagctaatgacgaagaaggtcgtgtt
gcggccctgcgtattccaggtggcgcgagcttatcccgtaagcaaatcgatgattacact
aagtttgtcggtatatacggtgctaaaggtttagcgtggatgaagctaaacgaccttact
caaggcttagaaggcattcaatcacctgtgctcaagttcttgaacgaagacattgtgaac
gaaatcatcagccgcactggcgcacaaactggcgatatcatcctgtttggtgccgataac
gcgactgtggttgctgaatctatgggcgcactgcgtctaaaagccggtgaagactttaac
ctgctcgaaggtcaatggcgtccactgtgggtggttgacttcccaatgtttgagaagatc
aacggcagcttccacgcggttcaccatccgtttactgcgccacgcggcgtgacaccacaa
gagctggaagccaatccggctaaccgtgtgtcagatgcctacgacatggtattaaacggc
tgtgaattaggtggtggttcagttcgtatccacaaccaagagatgcaatctgcggtattc
cgtatccttggcattactgatgaagaagcgaaagagaaattcggcttcttactcgaagcg
ctgcgctacggtacgccaccacatgcgggtctggcattcggtttagaccgtattatcatg
ctgatgacgggcgcaagctcaatccgtgatgtgatggctttcccgaaaaccaccactgct
gcgtgtccgttaaccaatgctccaggttttgctaacccacaacaattagctgaactaggt
atttccgtggtgaaagccgcgaagactgaagactaa
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