Shewanella sp. MR-4: Shewmr4_1919
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Entry
Shewmr4_1919 CDS
T00388
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
she03032
]
Shewmr4_1919
03400 DNA repair and recombination proteins [BR:
she03400
]
Shewmr4_1919
Enzymes [BR:
she01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Shewmr4_1919
DNA replication proteins [BR:
she03032
]
Prokaryotic type
DNA Topoisomerases
Shewmr4_1919
DNA repair and recombination proteins [BR:
she03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Shewmr4_1919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PUA_4
Motif
Other DBs
NCBI-ProteinID:
ABI38993
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All DBs
Position
2286682..2289522
Genome browser
AA seq
946 aa
AA seq
DB search
MPNHVFGPLNDTDYALSANFQGNEQFMTDLASSISPINIEDELKNSYLDYAMSVIVGRAL
PDVRDGLKPVHRRVLFAMSELKNDWNKPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQ
PFSLRYTLVDGQGNFGSVDGDSAAAMRYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQ
IPAVLPTRVPNLLINGSSGIAVGMATNIPPHNLTEVVKGCLALIADPALSIEQLMEHIPG
PDFPTAAIINGRKGIIDAYKTGRGRAVMRALAEVETEDNGRERIIVTEIPYQVNKAKLIE
KIAELVKDKKIEGISGLRDESDKDGMRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMV
ALTNGQPKLFNLKEMLECFILHRREVVTRRTVFELRKARERAHILEALAVALANIDPIIA
LIKASPTPADAKVKLVEQGWALGHVQGMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQA
QAILELRLHRLTGLEHDKIIAEYEELLEFIAGLLFILRSPERLMEVIKEELEEILAEYGD
ARRTVINANEIDMSLEDLINEEDVVVTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDE
DFVEKLLVANTHDTILCFSDFGKMYWLKVYQLPLASRTSRGRPIVNLLPLSDGERITAIL
PVREYAEDKYIIMATSNGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIM
LFSNEGKVVRFKEGEEVSVLDENGNPVLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQ
KVVSLIVPKGDGAILTVTENGYGKRTELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVG
GNDEIMLISDKGTLVRTPANGVSIIGRNTQGVTIIRTASDEKVVGLQRIDEIQGDEDEVE
LDENGMPIVPVVAEGNSVHEEPLEEELEEELDEDEDEELDDEQDED
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatcacgtttttgggccgctcaatgatacggattatgcgttgtcggctaatttt
caggggaacgagcagtttatgactgatctggcatcatctatttcgccaattaatatcgaa
gacgaactaaagaattcgtaccttgattacgccatgagcgtcatcgtgggacgtgcatta
ccagacgtgcgtgatggcctcaagcctgtgcatcgccgcgtgctgtttgccatgagtgaa
ttgaagaacgattggaacaagccgtacaaaaagtctgcccgtgtggttggtgacgtgatc
ggtaaatatcacccccatggtgattcagcggtttacgatacaatcgtacgtatggctcag
cctttctctctgcgttacaccttagtcgatggtcaaggaaacttcggttcggttgacggt
gactccgcagcggcaatgcgttataccgaaatccgtatggataagttagcgcaccagctc
ctcgccgatcttgaaaaagaaaccgttgactatgtgccaaactacgacggcactgaacaa
attcctgcggtattaccgacacgcgtacctaacctgttgatcaacggttcatcgggtatt
gcggtaggtatggcgactaacattccgccccataacttaaccgaagtcgttaagggctgt
ttagcgctgatcgccgatcctgcgctgtctattgaacagctgatggaacatattccaggc
ccggacttcccaacggctgcgattatcaatggccgtaagggcattatcgatgcctataaa
acaggccgcggccgtgctgtcatgcgcgcgctggctgaagtcgaaactgaagacaacggc
cgtgaacgtattatcgtcaccgaaatcccttatcaggtgaacaaggcgaaactcatcgag
aaaatcgctgagttagtcaaagataagaagattgaaggcatcagcggtctgcgcgacgag
tctgacaaagacggtatgcgcatcgttatcgaaatcaaacgcggtgaagtgggtgaagtt
gtcctgaacaatctctatgcccagacacagatgcaatgttcttttggtatcaacatggtg
gcattgaccaatggtcagcctaagttgttcaacttaaaagaaatgctcgagtgctttatc
ctgcaccgccgtgaagtggtgactcgtcgtaccgtattcgaactgcgtaaagcgcgagaa
cgcgcccatattcttgaggcattagcggttgcgctggccaacatcgacccgattattgcg
ctgatcaaagcttcgccaacgccagcagacgctaaagtcaaactggttgagcagggctgg
gcacttggccatgtacagggcatgcttgaaaaagcgggtgacgatgcggcgcgtcctgaa
tggttagagccagaattcggtatccgtgatggcttatattacctgactgagcaacaggct
caggcgattctagagctgcgtttacaccgtttaactggtcttgagcacgataagatcatc
gccgaatacgaagaactgctcgagttcatcgcgggtctgctgtttattctgcgcagccct
gagcgtttgatggaagtgatcaaagaagagctagaagaaattcttgctgaatacggtgat
gctcgccgcactgtcatcaacgccaatgaaattgatatgagtcttgaagacttaatcaac
gaagaagacgtggttgtgaccctgtcacacttaggttacgccaagtaccaaccgctgagc
gattatcaagcccagcgccgtggtggtaagggtaaagccgcaactaaggtgaaagacgaa
gatttcgttgaaaaactgctggttgccaacactcacgataccattttgtgcttctcagat
ttcggtaagatgtactggcttaaggtctatcaattaccgctggcgagccgtacttcccgt
ggtcgtccgattgttaacttactgccgctgtccgatggtgaacgcattactgcgattcta
ccagtgcgtgaatacgcagaagataagtacattatcatggcgacctctaacggtaccgtg
aagaaaactgcgctgacagcttatagcaacccacgtgctaacggcattatcgccgtgaac
ctgaaagacggtgaccaactgatcggtgtcgatatcaccaacggtgatgatgagatcatg
ttgttctcgaacgaaggtaaagtggttcgctttaaagaaggcgaagaagtgtccgtactc
gatgaaaacggcaacccagtgctggatgaagaaggtaacccacaaatcaacttcaagggc
gtgcgtccaatgggtcgcggcgcgaccggtgttcgcggtatcaagcttgaagaaggtcaa
aaagtggtgtctctcatcgtacctaagggcgatggcgctatcttaaccgtgaccgaaaac
ggctatggtaaacgtactgaactgtctgaatacccatctaagagccgcgcgactaaaggt
gtggtatcgatcaaggtgagtgagcgtaacggtgcggttgttggcgcggtacaagttggc
ggtaatgacgaaatcatgctgatcagcgataaaggtaccttagtccgtacgcctgcgaac
ggtgtgtcaatcatcggccgtaacacccaaggtgtgaccattatccgtacggctagtgat
gagaaagtggttggtctgcaacgtatcgatgagatccaaggcgacgaagatgaagtcgag
ctggatgaaaacggtatgccaatcgtcccagttgtcgctgaaggtaactctgttcatgaa
gagcctttagaagaggaactggaagaagaattagacgaagacgaagacgaagagcttgac
gacgagcaagacgaagactaa
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