Shewanella sp. MR-4: Shewmr4_1967
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Entry
Shewmr4_1967 CDS
T00388
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
she
Shewanella sp. MR-4
Pathway
she00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
she00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shewmr4_1967
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
she01007
]
Shewmr4_1967
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
she03016
]
Shewmr4_1967
Enzymes [BR:
she01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Shewmr4_1967
Amino acid related enzymes [BR:
she01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Shewmr4_1967
Transfer RNA biogenesis [BR:
she03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Shewmr4_1967
Prokaryotic type
Shewmr4_1967
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
RNase_Y_N
ERM_helical
Motif
Other DBs
NCBI-ProteinID:
ABI39040
UniProt:
Q0HIS7
LinkDB
All DBs
Position
2343802..2345088
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AA seq
428 aa
AA seq
DB search
MLDPKFLRNELAVTAERLATRGFILDVAHLTQLEEKRKSLQVATEELQASRNAISKSIGQ
AKARGEDVDAIMAQVGDLGAQLDAKKVELAAVLEEVNAIAMSMPNLPDESAPIGADETEN
VEIRRWGTPRSFDFPVKDHIDLGEGLNGLDFKSAVKITGSRFIVMKGQIARLNRALGQFM
LDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL
TNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPEDSM
AALEALTGHAETVLQRLGLPYRTVILCTGDMGFGSSKTYDIEVWLPGQNTYREISSCSNM
KDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSVTIPEALRPY
MGGLTQIG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcctaaatttttgcgcaacgaattagcagttaccgctgagcgattagctacc
cgtggttttattttagatgtcgctcatctcactcaattagaagaaaaacgtaagtcactg
caagtggcgactgaagagttacaagcttcgcgtaatgctatttccaagtccatcggacaa
gcaaaagcccgcggcgaagatgtggatgccatcatggcgcaggttggcgatttaggtgcg
caattagatgcgaagaaagtcgagctggctgcggtacttgaagaagtgaacgcgattgcc
atgtcgatgccaaacctgccggatgagtctgcgcctataggtgctgacgagactgaaaac
gttgaaatccgtcgttggggcacaccacgcagcttcgatttccctgttaaagatcatatc
gacttaggtgaaggcctaaacggtttagattttaagagcgccgtgaaaatcactggctca
cgctttatcgtgatgaaaggccaaatcgcccgtttaaaccgcgcattaggtcagttcatg
ttagatctgcacactactgagcacggttataccgaagcttacgtgccattactggttaac
gaagcaagcttactgggtacaggccaattgcctaagtttggtgaagacttgttccacact
aaacctgcgaccgaagaaggccaaggtttaagcctgatcccaaccgcagaagtgccatta
acgaacttagtgcgtgacagcattgtcgatgaagacgaattaccgattaagttaaccgcg
cataccgcctgtttccgcagtgaagctggctcatacggtaaagatacccgtggtcttatc
cgtcagcaccaattcgataaagtggaattagtgcaactggttaagcctgaagactcaatg
gcggcgctcgaagcactaacgggccacgctgaaaccgtactgcaacgcctcggtctgcca
taccgcactgtgatcctgtgtaccggtgacatgggctttggttcaagcaaaacctacgat
atcgaagtgtggttaccaggccaaaacacttaccgcgagatttcttcatgttcaaacatg
aaagacttccaagcccgtcgtatgcaagcccgttaccgcgttaaggccgataacaagcca
gccttgctgcacaccttaaacggctcaggcctagcggtaggtcgtacgttagttgcgatt
ttagaaaactatcaaaatgccgatggtagcgtgaccattccagaagctctgcgtccatac
atgggcggactgactcagatcggttaa
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