Shewanella sp. MR-4: Shewmr4_1979
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Entry
Shewmr4_1979 CDS
T00388
Name
(GenBank) L-arabinose isomerase
KO
K01804
L-arabinose isomerase [EC:
5.3.1.4
]
Organism
she
Shewanella sp. MR-4
Pathway
she00040
Pentose and glucuronate interconversions
she01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Shewmr4_1979
Enzymes [BR:
she01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.4 L-arabinose isomerase
Shewmr4_1979
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AraA_N
AraA_central
Arabinose_Iso_C
Motif
Other DBs
NCBI-ProteinID:
ABI39052
UniProt:
Q0HIR5
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Position
2353647..2355149
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AA seq
500 aa
AA seq
DB search
MKAFKQKQVWFITGSQDLYGPKVLEQVAKNSEQIVYGFNESSAISIEVVYKPTVKSPREI
HAVCQAANSDENCVGVILWMHTFSPAKMWIAGLNELSKPFMHLHTQFNAELPWSEINMNY
MNTHQSAHGCREFGFIGTRMRKERKVVVGHWQSSDVQAQIDDWCRAAAGWHESQNLRIAR
FGDNMRQVAVTEGDKVAAQIQFGYEVHAYSLGELNEAIAAIAEGDVTAQLDRYASEYQVG
NELFGDEYQLDRLRKEAKIELGLTQFLTQGGFGAFTNCFENLTGMTGLPGLATQRLMANG
FGYGGEGDWKTAAMVRIMKVMGQGRAGGTSFMEDYTYNFGATDQVLGAHMLEVCPSIAAA
KPRLEVHRHTIGVRCDVPRLLFTGKAGPAINVSTIDLGNRFRIILNELDTVTPPQDLPNL
PVASALWEPRPNLAVAAAAWIHAGGAHHSAYSQAITTDQIVDFAEMAGAELVIIDADTKI
REFKNELRQNSVYYGLARGL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttcaaacaaaaacaagtgtggtttatcacgggttcgcaggatttatacggc
ccaaaagtattagagcaagtcgctaaaaacagtgagcaaattgtttatggctttaatgaa
tcttccgccatttccattgaagtggtgtataagccaaccgtaaaatccccacgtgaaatt
cacgccgtatgtcaagcggccaacagcgatgaaaactgtgttggcgttattctgtggatg
cacactttctctcctgccaagatgtggattgctggccttaatgaattaagcaagccattc
atgcacttacacactcagttcaatgctgagctcccttggagcgaaatcaatatgaactac
atgaacacccaccaaagtgctcacggttgccgcgaatttggttttatcggcactcgtatg
cgtaaagagcgcaaagtggttgtgggtcactggcaatcgagcgatgtacaggctcaaatc
gatgattggtgccgcgcagcggcgggttggcacgagagccaaaacctgcgtattgcccgc
tttggcgacaacatgcgtcaagtggccgtaaccgaaggcgacaaagttgccgcacaaatt
caattcggttacgaagtgcacgcctacagcttaggtgaactcaatgaagcgattgcagcc
attgccgaaggcgatgtaaccgcacaactcgaccgttacgccagcgaataccaagtgggt
aacgagctatttggcgatgaataccaattagaccgtttaagaaaagaagccaagattgaa
ctcggcttaacccaattcttaacccaaggtggatttggtgcctttaccaactgcttcgaa
aacctcaccggcatgacaggattaccaggactggctacccaacgtctgatggcgaacggt
ttcggttacggcggtgaaggtgactggaaaacggctgccatggtgcgcatcatgaaggtg
atgggccaaggccgcgccggtggtacttcatttatggaagactacacctataactttggg
gcgactgaccaagttcttggcgcccacatgttagaagtgtgcccatcgattgctgctgca
aaaccgcgtttagaagttcaccgccacaccattggtgtgcgttgtgacgtgccacgtctg
ttattcacaggtaaagcgggcccagcaatcaacgtatcgactatcgatttaggcaaccgt
ttccgtatcattctcaatgaattagatacagtgacaccaccacaggatctgccaaatctg
cctgtcgcatctgcgctgtgggagcctcgtccgaatttagcggttgccgccgcagcttgg
atccacgccggtggtgctcaccactcagcttacagccaagctatcacgacggatcagatt
gtcgactttgctgaaatggccggtgctgaactggttatcatcgatgccgatactaagatc
cgcgagtttaagaatgagcttcgccaaaattccgtttattacggtttagcaagaggttta
taa
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