Shewanella sp. MR-4: Shewmr4_1988
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Entry
Shewmr4_1988 CDS
T00388
Name
(GenBank) inner-membrane translocator
KO
K23509
galactofuranose transport system permease protein
Organism
she
Shewanella sp. MR-4
Pathway
she02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
she00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shewmr4_1988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_1988
Transporters [BR:
she02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
Shewmr4_1988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ABI39061
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Position
2364269..2365486
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AA seq
405 aa
AA seq
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MKSSAETLSSTRMSADLISPQMNASEAHSSERQPRMQESDKTMVQEKNARYQAGKSTSIG
RYLWPLLALTILLLANLFIDSSFFNISYQDDRLYGSLIDILNRSAPVALLSIGMSLVIAT
GGIDLSVGAVMAIAGAVCANLLLVPDISLVTVIAAGLIVGLLAGCINGGLVSFLGIQPIV
ATLLLMVAGRGVAQLINQGQIITFQHPGFAAIGVGQFLGLPMPVWIVIGMLTFSQLLLRK
TALGLFIEAVGCNAKASRYLGINDKSIKLFAYGIAGLCAALAGMISTADIQGSDANNAGL
WLELDAVLAVVIGGAALTGGRFSLILSVVGALIIQTLATTIIVSGLPAKFNLLIKAIVIL
TVLLLQSAKFRRQLSALFTSKRQANAKPAEKGTSAKASTATGEKL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagctcagccgaaaccctatcatccacacgcatgtccgccgatttgatctcaccc
cagatgaacgcatctgaggcgcattcatctgagcggcaaccgcggatgcaggaaagcgac
aagaccatggttcaagaaaaaaacgctcgttaccaagcgggcaagtcgacctccattggt
cgatacctgtggccactattggccttaactattctgttactggccaatctgttcattgac
agcagtttcttcaatatcagctatcaagacgaccgactctatggctctttgattgatatt
ttaaatcgcagtgcacccgtggcgctgctctccattggcatgagtctcgtgattgccact
ggcggtattgacctgtcggttggtgccgtgatggcgattgcgggcgcggtttgcgcgaat
ctactgttagtgccggatatcagcttagtcaccgttattgcagcaggcctgatcgttggg
ctcttagctggctgtattaatggcggtctggtgagtttcttaggcattcaaccaattgtt
gcgaccttgctgctcatggtggcggggcgcggtgtcgctcagcttatcaaccaaggacaa
attatcaccttccagcaccctggctttgccgccattggcgtgggccagtttttaggcctg
ccgatgccagtgtggattgtgattgggatgctaaccttcagccaattactgctgcgtaaa
accgctttagggctttttatcgaagcggttggctgtaatgccaaggcgagtcgttacctt
gggatcaacgataaatccatcaaactgtttgcctatggcattgcgggtctgtgtgcggcc
ttagccggcatgatcagcaccgccgatatccaagggtcagatgcgaataacgcagggctt
tggcttgagctcgatgcggtgctggccgtcgtaattggcggcgcagcgctcacaggcggg
cgtttctcgttaattttgtcggtcgtcggcgcgctgatcattcaaaccttagcgaccacc
attatcgtcagtggtttacccgctaagtttaacctgctgatcaaagccatcgttatcctg
accgtactgctgttgcaatcggctaaatttaggcgccaattgtcggcgctgttcacatcc
aagcgtcaagcgaatgctaaaccagcagaaaagggcacaagtgcaaaagccagtaccgca
acaggagaaaaactatga
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