Shewanella sp. MR-4: Shewmr4_2016
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Entry
Shewmr4_2016 CDS
T00388
Name
(GenBank) PP-loop domain protein
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
she03016
]
Shewmr4_2016
Transfer RNA biogenesis [BR:
she03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Shewmr4_2016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP_bind_3
Thioredoxin_8
Motif
Other DBs
NCBI-ProteinID:
ABI39089
UniProt:
Q0HIM8
LinkDB
All DBs
Position
2400672..2401640
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AA seq
322 aa
AA seq
DB search
MLEAMSEVTASQMPEELSKKQITRLNKLQKRLRREVGSAIADYNMIEDGDRVMCCLSGGK
DSYAMLDILLNLQQRAPVQFEIIAVNLDQKQPGFPEHVLPAYLDSLNIPYHILEKDTYSI
VKEKIPEGKTTCSLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETMFLNMFYGGKMKA
MPPKLLSDDGANVVIRPLAYCREKDLEEYAELKKFPIIPCNLCGSQENLKRQAVKDMLNQ
WDRLYPGRIETIFTAMQNTAPSQGVDREQFDFVSLKRDPNAPMKGDVAEADLPAFDFLDI
ANSGHIDLDAAKRINIVNVYEA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagctatgtctgaagttacggcgagtcaaatgcctgaagaattatcaaaaaaa
caaattacccgtctgaataaattacagaagcgtctgcgccgtgaagtgggtagtgccatc
gccgattacaacatgattgaagatggcgaccgagtcatgtgctgcttaagtggcggtaaa
gacagttacgccatgctggatattctgcttaatctacagcagcgcgcgcccgtacagttc
gaaattattgccgttaatttagatcaaaaacagccgggtttccctgaacacgtactgcca
gcctatttagacagcctaaatattccttatcacatcctcgagaaagacacttactcgatt
gtgaaagaaaagatccctgaaggcaaaaccacttgctcgctgtgctctcgcctgcgtcgc
ggtacactctatggctttgcccagcgcattggcgcaaccaaaatcgccctaggccaccac
agagacgatattattgagaccatgttcctcaacatgttctacggcggcaagatgaaagcc
atgccacctaagttgctctcggacgacggcgctaacgtggttattcgtccactcgcctat
tgccgcgaaaaggatttagaagaatatgcggaattgaaaaaattccccatcattccctgt
aacctttgtggctcgcaggaaaacctcaagcgccaagcagtgaaagacatgctcaatcag
tgggatagactctacccaggccgtattgaaaccatttttaccgccatgcaaaacaccgcc
ccttcacagggtgttgaccgtgagcagtttgactttgtgtcgttgaaacgcgatcccaac
gcgccaatgaagggtgatgtggccgaagccgatttacccgcatttgactttttggatatc
gccaacagcggccatatcgatttagatgcggcaaaacgcatcaatatcgtcaacgtttac
gaagcgtaa
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