Shewanella sp. MR-4: Shewmr4_2134
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Entry
Shewmr4_2134 CDS
T00388
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_2134
Transporters [BR:
she02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr4_2134
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plug
Motif
Other DBs
NCBI-ProteinID:
ABI39207
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All DBs
Position
2550110..2552929
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AA seq
939 aa
AA seq
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MMRFKPSLLTLALVAAGASMHSYAADDVKEKDLKAKDAEIEVIQVKGFRTSVIKSLNEKR
FGDTVSESISADDLGALPDQSIADALTRLPGVTAVRTGGQASGLNIRGLDGDFVFATLNG
HEQVTTGGKRAIEFDQYPSELISQAAVYKTPKASLIEGGVAGTVELKTADPLKNDKDQSF
NINARGSFNDRADEISDAEQYGNRLSLAYQGKFLEDTLGVAVGYAHLYQPYVASQFIGLR
FNDDKKDVNGDGVTEAISEGFELQQKGGDDTRDGYMAAIHWQPSDSLSVKGDLFHSKFTS
ENFARGFRVKSLKNGTISDAVVENGSMTGGTVSTDGTDNFAVFVINDNDSKYSELTSGSL
NLEWNNGGALTVAADVSYSKADGEFVNGGTRAVLYDDLGNEVRSAESVTYQLNGLNPADV
SFANDYTNTSTLGLKEVGMWPYNQQNDLIAYKLDFNYVLDTSFVSSVDFGVRYAEREFNA
QRSQAGYGFEFGKNPDNQPVLALNGDMAKVVDFGGELAGYPSFLAIDFNKAIELVNAQLA
ATGQSPFTPTANWSNNWTMIQSGAVNEDVLAGYVQANLDFDIGDVKVTGNLGVRVVHTDQ
SSTGLQQVGYGLGEAITDEQGVVSTDYIRNKVGKTYTDYLPSLNLTFHLTENDQLRFAAA
SVMSRPPIDKLKSGMGSWYDDSATPGYKKYNAWGNTSPLLDPFYADQYDLSYEHYFEESE
GAVVVALFYKDIKSFINNFTIQPFDFEANGFIVPDTIIDNGVEFPVVKDEGQYQTAINND
KGGYIRGIELGYTQVFDFLPSPLDGLGFTGSYSYSDSEVEFTTDLSGSNLTIPLPGLSEN
VLNTTLFYTLDGFDTRVSMRYRSSYVSEQVAVESQLAFFDAETIVDYQASYALDNGLKFL
FQINNLTDEPNKTYFGEEHQTGTIQYFGRQYFLGLTYSL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgatttaaacccagcttgctgaccttagcactcgttgctgcaggcgccagtatg
cactcctacgcagcagatgatgtaaaagaaaaagacctaaaagccaaagatgccgaaatt
gaagtaatccaagttaaaggcttcagaaccagtgtgatcaaatcgcttaatgaaaaacgt
tttggcgataccgtatctgaatctatctctgccgacgacctcggcgccctgcccgaccaa
tctatcgccgatgcgttaacccgtttaccaggcgtcaccgctgttcgtactggcggccaa
gccagtggtttgaacatccgtggtctggatggcgatttcgtgtttgcaaccctcaatggc
cacgaacaggtgaccactggtggtaaacgtgccattgagtttgaccaatatccatccgaa
ttaattagtcaggcagcggtttacaaaacacctaaagcctcactgatcgaaggcggcgtg
gccggtacggttgaattaaaaaccgccgatccgctgaagaatgacaaagatcaatcattc
aatatcaatgcccgtggcagctttaacgatcgcgccgatgaaatctccgatgcagagcaa
tacggcaatcgtttaagtctcgcttatcaaggtaaattcctcgaagacaccttaggggtg
gcagtgggctatgctcacctgtatcaaccttatgttgcaagccaattcattgggttacgt
tttaatgatgataaaaaagacgttaacggtgacggtgtaaccgaagcgattagtgaaggt
tttgaactgcaacaaaaaggcggcgacgatacccgtgatggctatatggctgctatccat
tggcaaccgagtgacagcctgagtgtgaagggcgatctgttccactctaaatttacctct
gaaaactttgcccgtggtttccgcgtcaagtcattgaaaaatggtactatcagtgatgcc
gttgtcgaaaacggttctatgacgggtggtacagtctctactgatggcacggataacttt
gcggttttcgtgatcaacgataacgactcaaaatactcagaattgacttcaggctctttg
aaccttgagtggaataacggtggcgcactgacagtggcggccgatgtcagctattccaaa
gccgatggtgaattcgttaacggcggtactcgcgccgtgttgtacgatgatctgggcaat
gaagttcgttcagctgagtctgttacttatcaactgaatggcttaaatcctgcggatgtc
agctttgctaacgactacaccaatacctcgaccctaggtctgaaagaagtgggtatgtgg
ccctataatcagcaaaacgatctgattgcctacaaactcgattttaactatgtcttagac
accagctttgtctcttctgttgattttggtgtgcgttatgctgaacgtgaattcaacgca
cagcgttcacaggcaggttacggtttcgagtttggtaaaaaccctgataatcaaccagtc
ctagcactgaacggcgatatggccaaagtggttgattttggtggtgaattagcaggttac
ccaagtttcctcgccattgactttaacaaagccattgaactggtgaacgcacaactggcg
gcaactggccaatcacctttcactccaacggcgaactggtcaaataactggaccatgatc
caaagcggcgcggtcaatgaagatgtattagccggttacgtgcaggcaaacttagacttc
gatatcggcgatgttaaagtcacaggtaacttaggtgtacgtgtcgtacacacagatcaa
agcagtactggtctgcaacaagttggttatggtttaggtgaagccattaccgatgagcaa
ggcgtcgtaagcacggattatatccgtaacaaggtcggcaaaacctataccgactactta
ccgtcactgaacttaaccttccacctgactgaaaacgatcaactgcgttttgcagcggcc
tctgtgatgtcacgcccaccaatcgacaagttaaagtcaggtatgggttcttggtatgac
gactctgctacgcctggatacaaaaagtacaatgcgtggggtaacaccagtccgttatta
gatcctttctatgcggatcaatatgacttgtcctacgagcactactttgaagagtctgaa
ggtgcggtcgttgtggccttgttctataaagatattaaatctttcatcaacaacttcact
attcaaccatttgattttgaagcgaatggctttatcgtgcccgataccattatcgacaat
ggcgttgagttcccagttgttaaagatgaaggccaatatcaaacagccatcaacaacgat
aaaggcggttatatccgtggtatcgagttaggctatacccaagtgtttgatttcctaccg
tcacctttagatggtttaggtttcactggtagctattcctattcagacagtgaagtggaa
ttcactacagacttaagcggttctaacctgaccattccattaccaggtctgtcagaaaac
gtgctgaacactaccctgttctacaccttggatggtttcgatacccgtgtgagcatgaga
taccgtagtagttatgtgtcagagcaagttgcggttgaatctcaactggcgttctttgat
gcagaaacgattgtggattatcaggcttcttatgcgctggacaacggacttaagttcctg
ttccaaatcaataacctcaccgatgagcctaataaaacttactttggtgaagagcatcaa
accggaacaattcaatacttcggtagacaatatttccttggtttaacctactctctgtaa
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