Shewanella sp. MR-4: Shewmr4_2200
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Entry
Shewmr4_2200 CDS
T00388
Name
(GenBank) Vault protein inter-alpha-trypsin domain protein
KO
K07114
Ca-activated chloride channel homolog
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_2200
Transporters [BR:
she02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr4_2200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
VWA_3
VWA_2
VWA
VIT_2
VWA_CoxE
DUF2201
Gram_pos_anchor
Motif
Other DBs
NCBI-ProteinID:
ABI39273
LinkDB
All DBs
Position
complement(2627895..2630174)
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AA seq
759 aa
AA seq
DB search
MITGKRVKEVCQTLAMLVIGASICWGLPFAVLASPNSVGTLSAPQNIAATFDEHTASTLP
AFSFDDVTQGMLVYQTASGRLMPSLPVDTQVSMQVSGLTNRVSVKQVFSNQTGFVLNGRY
LFPLPNEAAVDSLRLHIGERIIEGQIHPKQQAKQIFEQAKAEGKRASLVSQERPNMFTTE
VANLAPDEELVVEISYQETIHYEDGLFSLRFPLVVAPRYIPGLTLGGNNHERVTSSQVFD
ADRIIAPIRDASSETDPVLKADIKVKLGEGVDKSAVVSPYHPITIDEKQGQLTAALANRV
PANRDFVLQWRLKQGTSPVAWVFNQAGKTHTTQDDNASADSGSTASVDGNSNSNNNYSLV
MVLPPKVEASEQPNLPRELILVIDTSGSMAGDSIIQAKNALRYALRGLRPQDSFNIIEFN
SDVSLLSSTPLPATATNLAMARQFVNRLQADGGTEMAQALNSALPRQAFNTASGEDKSLR
QVIFMTDGSVGNESALFELIRNQIGDNRLFTVGIGSAPNSHFMQRAAELGRGTFTYIGDV
DEVEQKISKLLAKIQYPVLTDLQVRFDDGSVPDYWPAPIPDLYRGEPVLISLKRHPREPQ
ELVISGRQGHKNWQQSLSLQANDASHSAIDVAQPTAGLDLLWARKQIAALELSKNGANDD
KVKQQVTALSLNYHLVSPYTSLVAVDLTPITSNAMSRDAVVRQHLPLGWQPMGVLPQTST
SSRFDMLLGGSVLLLALMLALSIRRQQRQQRALSLALNS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagggaaaagggtaaaagaagtttgtcaaacactggcgatgctagtgatcggc
gcctccatttgttgggggctaccatttgcggtgttagcctcaccgaacagtgtcggcacc
ttatcggcgccacaaaatattgccgcgaccttcgatgaacacacagcgagcacattgcca
gctttcagtttcgatgacgtcacccaagggatgttggtgtatcaaaccgccagcggccgt
ttaatgccgtccttacccgtggacacgcaggtgtcgatgcaggtctcggggttaaccaat
agggtgagcgtaaagcaggttttcagtaatcaaacgggatttgtcctcaatggccgttat
ctgttccctttacccaatgaggcggcggtggactcactgcgtttgcacattggagagcgg
atcatcgaaggtcaaattcacccaaagcagcaagcaaaacagatttttgagcaggccaaa
gccgaagggaaacgcgccagtctagtcagccaagaacggcccaatatgttcacgaccgaa
gtagccaaccttgctcccgatgaggagttggtggtcgaaatcagctatcaagaaaccatt
cattatgaagatggtctctttagcctacgttttccgctggtggtggcgccgcgctatatt
cctgggttaacgctaggcggaaacaatcatgagcgcgtgaccagcagccaagtcttcgat
gctgaccgaattattgccccgatccgcgatgccagtagtgagacggatcccgtgcttaag
gccgatattaaggtcaagctcggtgaaggcgtggacaaatccgccgtagtgagtccgtat
catcccattacgattgatgaaaaacagggccaactgacggcggccttggctaatcgcgtg
cccgctaatcgtgactttgtgctgcaatggcgtcttaagcagggcaccagtcccgtggct
tgggtattcaaccaagcgggcaaaacccatacgacgcaggacgataatgcgagtgcagat
agtggttcaactgccagtgtcgatgggaatagcaatagcaacaataactacagcttagtg
atggtcctgccgcccaaagtcgaggccagtgaacaaccgaacttgccccgtgagcttatt
ttagtgattgatacatcggggtcgatggcaggagattccatcattcaggcaaaaaatgcc
ctgcgttatgcgctgcgcggtttaaggccacaggatagttttaacattatcgaatttaac
tcagatgtgtctttactgtcgtcaacaccgctgcccgcgaccgcgactaatctcgccatg
gcacgtcagtttgtgaatcgtttgcaggccgatggtggcaccgaaatggcgcaggcttta
aattccgcgctgccaagacaagcgtttaacacagcgtcgggtgaggataagtcgttaaga
caagtgatctttatgaccgatggctcagtcggtaatgagtcggcgttgtttgagttaatc
cgcaatcaaatcggcgacaaccgtcttttcaccgtcggcattggctcggcgccgaactcg
cattttatgcagcgtgcggctgaacttgggcgcggtacttttacttacattggtgatgtg
gatgaagtggagcaaaagatcagcaagttactagccaaaatccagtatccggttctgacc
gatttgcaggtgcgctttgacgatggctctgtacctgattactggcccgcgcctataccc
gatctatatcgcggtgagccggtattgatcagcctaaagcgccacccacgtgagcctcag
gaactggtgatctccggtcgtcagggccataaaaactggcaacagtcgctatctttgcaa
gccaatgacgcaagccattctgcaattgatgtagcgcaacccacggcgggactcgatttg
ctctgggcgcgcaaacagattgcggccttagagctgagtaaaaacggcgctaacgatgac
aaggtcaaacaacaggtcacggcgctgtcgctcaactatcacttagtcagcccttatacc
agcttggtcgcggtggatttaacccccatcaccagcaatgccatgagccgcgatgctgtg
gtgcgccagcatttacctttggggtggcagccaatgggtgttttgccacaaacatcgacc
tcgagccgtttcgacatgctcttagggggcagcgtgttactgcttgccttgatgttggcg
ctgtcgattcgtcgccagcagcggcagcaacgcgcgctgtcattagcgctgaatagttga
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