Shewanella sp. MR-4: Shewmr4_2235
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Entry
Shewmr4_2235 CDS
T00388
Name
(GenBank) fimbrial biogenesis outer membrane usher protein
KO
K07347
outer membrane usher protein
Organism
she
Shewanella sp. MR-4
Pathway
she02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
she00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shewmr4_2235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_2235
02044 Secretion system [BR:
she02044
]
Shewmr4_2235
02035 Bacterial motility proteins [BR:
she02035
]
Shewmr4_2235
Transporters [BR:
she02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr4_2235
Secretion system [BR:
she02044
]
Chaperone-usher system
Type 1 pilus assembly protein
Shewmr4_2235
Bacterial motility proteins [BR:
she02035
]
Pilus system
Fimbrial proteins
Shewmr4_2235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
ABI39307
LinkDB
All DBs
Position
complement(2671234..2673693)
Genome browser
AA seq
819 aa
AA seq
DB search
MNFIYHKLNVLSSVFPIFFILFGSFTFAKENEMIEFDSAFFNVNDASLIQKFAYSNYVPS
GVYPADLFVNGSFLKKVSLEVKEDGGKSRPCIDMNILNSLGIKESILIESDNLIKDCIVL
EEVIVGSAVNFTMGMSKLDIQVPQIYLDKVVRGYVDPAEWERGISAAYISYDLFGVSPND
VKNFNAYFDSGININGWYFKHKGMYSWNEYTGEQYNALDSYLYRPVASIKGNVVLGKKNT
NGRLFDTVPLLGMQIYDDQNMLADSQKGYAPEIFGVAKTNAIVKVEQNGRIIYETLVSPG
EFLINDLYPTGYGGNLNVIILEADGTEQRFSVPYESMAQLLRPNTSRYSFSIGQYKNDRL
SFTPMLIEGTYELGINNFVTGYWGGQANEDFLSLQGGLALGTSLGTFSFGGTQSYAFLDE
NYSGQSYELKYSKNIFSSGTNLSLGAYKYSTKEYMDYQTAMLYLDNIRRGYLYNDLYNSK
NRYLVTVGQSFPEGYGNLYLSGVFENFWNETNYSRQYQVSYNNQYKRLSWGVSVSRNEDQ
YGQYQTNYALSLSIPLGFEGELRDSRVRLNLNRDSDGYQQAQVGLSDVVGEEKLLSYDVS
VSNDESSNSFNGNASYVSPIAKLSANASKGNNYKSYGFGLSGTLVGHSGGVTLSPYSGNT
FALVEAKGMEGATVSGYKGIKINNLGHAVVPNLRPYQVNHIHVDPNGTSKNASLSNTVNK
TVPYDSAIVKLQYGTEIGFSILINSSFKGDALPFGADVIDENGLNIGNVAQGSIVFARTK
SSNGILKVNIKNGEYCSIKYDVNKNKSKGTLNILNVDCI
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcatatatcataaattgaatgttttaagcagtgtttttcctattttttttatt
ctgtttggtagttttacattcgcaaaagaaaatgaaatgattgaatttgatagcgcattt
ttcaatgtaaatgatgcctctttgattcaaaaatttgcatatagtaattatgttcctagt
ggtgtctatcctgccgatttattcgttaatggttcctttttaaaaaaggtttctcttgag
gttaaagaggatggtggtaagtcacgtccatgtatagatatgaatatcttaaactcatta
ggaataaaagagtctattttaattgaaagtgacaatcttattaaagactgtatagtattg
gaggaggtgattgttggctcagcagtgaactttacaatgggaatgtcaaagttagatata
caggtgcctcagatatatcttgataaggtcgttagaggatatgttgatcctgccgagtgg
gaaagagggatctctgcggcctatatatcctatgatttattcggtgtcagtccaaatgat
gtcaaaaattttaatgcatattttgattctggtataaatattaatggttggtattttaag
cataaaggtatgtatagctggaatgagtatacaggtgagcaatacaacgcactagactcg
tatctttataggccagttgccagcattaaaggtaatgttgttcttgggaagaaaaatacg
aatggtagattatttgacacagtaccattgctaggtatgcagatttatgatgaccaaaat
atgttagcagactcgcaaaaaggttatgcgccagaaatttttggtgtggctaaaactaat
gcaatcgttaaggtggagcaaaatggacgtattatatatgagacattagtgagtcctggc
gagtttttaataaatgatctctatccaacaggatatggtggtaatctaaatgtcattatt
ttagaagctgatggcactgagcaaagattttctgttccatatgagtcaatggcacaattg
ttaaggcctaatacctcaagatattcattttctatagggcagtataagaatgacagactt
tcatttactcccatgcttatagagggaacttatgagctcggtattaataactttgttacg
ggatattggggggggcaagcaaatgaagactttttatcattgcaaggtggtctcgctttg
ggcacaagtttaggtactttttcatttggagggacgcaatcttatgcttttctagacgaa
aattattcagggcagagttatgaattgaagtatagtaaaaacattttttcgagtggcact
aatctgtctttaggagcatataaatatagtaccaaagagtatatggattatcagacagct
atgctgtatttggacaatataaggagaggatacttatataacgatttatataattcaaaa
aacaggtacttagttactgtcggccaaagttttcctgaaggttatggtaatctttatctt
tctggagttttcgaaaacttctggaatgaaactaactattctagacaatatcaagtcagt
tataataatcaatataaaaggcttagctggggggtatcggtgagtagaaatgaagatcaa
tatggacaatatcaaacaaattatgctctttcactttcaattcctcttggttttgaagga
gaattaagggattcacgagttaggcttaatttaaatagagatagtgatggatatcaacaa
gcgcaagttggtttgtctgatgtggtcggggaagaaaaattactaagttatgatgtgtca
gtatcaaacgatgaaagttcgaactcctttaatggtaatgcttcgtatgttagtccaatt
gctaagttgtctgcgaatgcaagcaaaggaaataattacaagagttatggatttggtttg
tctgggacattagttggccattctggtggcgttacactttcaccatactcaggaaatact
tttgctttagttgaagccaaaggtatggagggagcaactgtttctggttacaagggaatt
aaaataaacaacctaggacatgctgttgtaccaaatttgagaccttatcaagttaaccat
attcatgttgacccaaatggcacttcaaagaatgcttccttgagcaatactgtgaataaa
acagttccttacgatagtgcaattgttaaattacaatatggaacggagattgggttttca
attttaattaatagtagttttaaaggtgatgcattgccatttggtgctgatgtgattgat
gagaatggtttaaatattggcaatgtagcgcaaggaagtatcgtttttgcaagaacaaaa
agtagtaatggaatattaaaagttaatataaaaaatggggagtattgttctattaagtat
gatgtcaataaaaataaatctaaaggcacgttgaatattttaaatgttgattgtatttag
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