Shewanella sp. MR-4: Shewmr4_2263
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Entry
Shewmr4_2263 CDS
T00388
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_2263
Transporters [BR:
she02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr4_2263
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ABI39334
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Position
complement(2704608..2707256)
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AA seq
882 aa
AA seq
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MHHLTLAAKAVRASIITMGSASVLFSGMTIAAEENAKVERIEVTGSRIKQVDMETVSPVT
VINAADIAMTGEKTVADVLNNSAINSFGSWRGISGYGSGASSTSNVNLRGLGSSATLVLL
DGRRMPGTSSSSGSVADTSSIPMAIVERIEILRDGASAVYGSDAVAGVINIITKKEFDGL
QLDYSTEQPRVEGGDANRLSIATGYNTDKGNITLTYEYYDTKAVMDRDIWNMDDPSYSAY
SGFSSVPNGSSASGWYSNSEICEQTENTVDTTDGNNVGRCLYNHGNVTKLFGDQTRNSIL
SNFSYEITDTIQFRGRASASLAETETRYAGTPVSTNYPVMSADNKFNPLGEDMTLYMRSA
QIGERDTLTETNNVDILGGFVGTLDFGNGIDWELNAQHSRSTTNSFNYNLINDEIVQQGI
DSEQYDIFNTSGMSYQQWNQQMTELYRKAAHTGVYQGKFESTQLDGLASTLLVDNGDVSV
AMVGGLEYEMIKFKQTSDPESASGIISGGSGGDDVDAERDRSAAYLEFQVGLPANVELSA
AVRYERYEQEGSLTGAQGQVVNSSTFDAVVPKFGLSWRPVDSLLLRASYGDSFRAPNMSE
MFSSQSLSFEKAVDSLWCNEPGNVDAVYCATNNQHKTWYGGNPDLEAEEGNSLTLGGVWN
VTDDWNVELSYFSITYDNKIESVDVDDILRDEIKNGSSPYIHRGADGKIEYIEAGVRNLA
SVETSGIDFVTAYNLETAIGDFNFKVDLTHVLDFKKQDNAEAEMIDYAGVTDTPDWRGNF
ATSWKYEDFSAAWTVVYIGSQSADYYNTLEETDRYVDYSSYFKHNIQFAYSHAYNGTITV
GVNNLFDADAPNYYTYADYRDVNVGLYDVLGRTYYLRINQKF
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcaccatttaacgttagcagctaaagctgtacgcgctagtattatcactatgggttct
gccagtgttttattttcaggcatgacaattgcggcagaggaaaatgctaaagttgaacgt
atagaagtgactggttcacgtattaaacaggtggatatggaaactgtttcgcctgttact
gtgattaatgcggcagatattgccatgacgggtgagaaaaccgtagcggatgttttaaat
aactcggcgataaatagttttggttcatggcgtggcatttcaggatatggttcgggggcg
agttcaacgagcaatgttaaccttcgtggcttaggctcatcggcaacacttgtgttgctt
gatggtcggcgcatgccaggcactagctcaagctcaggctcggttgccgatacctcttct
atcccaatggcgattgttgaacgcatcgaaattctgcgtgatggtgcttctgcggtttat
ggttctgatgcagtggctggtgtaatcaatattattacgaagaaagaatttgatggcctg
caattagattacagcactgagcaaccgagagttgaaggtggtgatgctaatcgcttgtcg
attgcaacgggctataacaccgataaaggtaatattaccttgacctatgaatattatgat
accaaagcggtaatggatcgtgatatttggaatatggatgatccgagttattcggcttac
agtggttttagttctgtgcctaatggcagttcggcatcgggttggtatagcaattcagaa
atttgtgagcaaactgaaaataccgtagatacaaccgatggcaataatgttggtcgttgt
ttatataaccatggcaacgtgactaaattatttggtgaccaaactcgtaactctatttta
tcgaacttttcctatgaaattactgacacgattcaattccgcggccgcgcatcagcctcg
ttagcagaaactgaaacccgttacgccggaacgccagtatcgactaattatccggttatg
agcgctgataataaatttaatccactaggggaggatatgacgctttatatgcgctccgct
caaattggtgagcgcgataccttaactgaaacaaataatgtcgatattttaggtggcttt
gtcggtacccttgatttcggtaatggtattgattgggaactaaatgcacagcattcccgc
tcgaccacgaattcatttaattataatttgattaacgatgaaattgttcaacaagggata
gattctgaacaatacgatatttttaatacctcgggtatgagttaccaacaatggaaccag
caaatgaccgagctgtatcgcaaagcggctcatacaggtgtgtatcaaggtaagtttgag
agtacgcaactcgatggtttagcctcaacactgctagtcgataacggcgatgtctctgtt
gctatggtcggtgggcttgagtatgaaatgatcaaattcaagcagaccagtgatcctgaa
tccgcatcgggcattatttcgggtggctctggtggtgatgacgtagatgctgaacgtgat
cgctcggcggcttatttagaattccaagtcggattaccagctaatgttgagttgtcggct
gcggttcgctatgaacgctatgaacaggaaggttcgctcacgggggctcagggtcaagtg
gttaattcatcgaccttcgatgctgtggtacctaagtttgggttaagttggcgtcctgtt
gatagcctattattgcgggcaagttatggggattctttccgcgcaccaaatatgagtgaa
atgttctcatctcaatcgttaagttttgaaaaggctgtcgattccctgtggtgtaatgag
ccaggtaacgttgatgccgtttactgtgcgaccaataaccagcacaaaacctggtacggc
ggtaatcctgaccttgaggcagaggagggcaattcgctgactttaggtggagtctggaat
gtcaccgatgattggaacgttgagttatcttatttttcaattacctatgacaataagatt
gaatctgtcgatgtagatgacatcctgcgtgatgaaatcaagaatggctcgtcaccttat
attcaccgtggtgccgatggcaagattgaatatatcgaagcgggcgttcgtaacttagcc
tcggttgaaacctcgggtatcgattttgtaaccgcctataaccttgaaacggcaataggt
gactttaacttcaaagtcgatctgacccatgttcttgactttaaaaagcaagataatgcc
gaagccgagatgattgattacgcgggcgtgacagatacacccgattggcgtggtaacttt
gcgacgagctggaaatatgaagatttttcagcagcgtggactgttgtgtatataggtagt
caatcggccgattactacaataccttggaagagaccgatcgttacgtcgattattctagc
tacttcaaacacaatatccagtttgcttatagccatgcttacaacggcacaatcacggtt
ggggtcaataatctgttcgatgccgatgcacctaactactacacctatgccgattatcgc
gatgtaaacgtcggcctctatgatgtattaggtcgtacttattatctgagaattaatcag
aagttttaa
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