Shewanella sp. MR-4: Shewmr4_2326
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Entry
Shewmr4_2326 CDS
T00388
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
she
Shewanella sp. MR-4
Pathway
she00280
Valine, leucine and isoleucine degradation
she00650
Butanoate metabolism
she00907
Pinene, camphor and geraniol degradation
she01100
Metabolic pathways
she01120
Microbial metabolism in diverse environments
she04146
Peroxisome
Module
she_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Shewmr4_2326
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Shewmr4_2326
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Shewmr4_2326
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Shewmr4_2326
Enzymes [BR:
she01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Shewmr4_2326
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
ABI39397
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All DBs
Position
2775452..2776399
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AA seq
315 aa
AA seq
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MSALDLANLSATSVSASSDRVSLFEMGPRDGLQNEAAVPTQAKVALIESLADAGVKRIEA
GSFVSPKWVPQMADSGDVLRQIRRQAGVVYSALTPNVKGLELALDAKASEVAIFGAASQS
FSQRNINCSIEESIERFIPLMDMAKAANIPVRGYVSCVLGCPYEGEIAASEVARVSEILY
KMGCYEISLGDTIGVGTPLKARKMLQAVMERVPVDKLALHFHDTYGQALANITACLDLGV
RSFDASVAGLGGCPYAKGASGNLASEDLVYMLHGLGLKTGIDLEKLALAGFGISKQLNRL
NGSKVANAILQGAKA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgctggatcttgcgaacttaagcgcgacctcggtaagcgccagctcggatagg
gttagcctgttcgagatggggccacgtgatggcttgcagaatgaagccgccgtcccgaca
caggccaaagtcgccttgattgaatccctcgccgatgcgggcgtgaagcgaattgaagca
ggcagctttgtgtcacccaaatgggtgccacaaatggccgatagcggtgacgtattgcgc
caaattcgccgtcaagcgggcgtggtttacagcgccctcacccccaatgtcaaaggctta
gagctggcgctggatgcaaaagcttccgaagtcgctatcttcggtgcggcgtcacaaagc
tttagtcagcgcaatatcaactgttcgattgaagagtcgattgaacgctttatcccgttg
atggacatggcaaaagccgccaacatcccagtgcgtggctatgtgtcctgcgttttaggt
tgcccctatgaaggggaaatcgcggcgagcgaagtggcaagagtgtctgaaatcctttac
aaaatgggctgttacgaaatttcgctcggcgacactatcggtgtaggcacgccgttaaaa
gcccgtaaaatgctgcaagccgtgatggagcgagtcccggttgataagctcgccctgcac
ttccacgacacctatggccaagcattagccaatattaccgcctgcctcgacttaggtgtg
cgcagctttgatgcctcagtggcgggcctaggtggttgtccgtatgcgaaaggcgcgtcg
ggcaatctagcgagtgaagacttggtctatatgctccacgggctcggtttgaaaacgggt
atcgatttagaaaaactggcattagcgggttttgggatcagcaaacaattaaatcgtctt
aatggctctaaagtcgccaatgcaatcttgcagggcgctaaagcctag
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