Shewanella sp. MR-4: Shewmr4_2422
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Entry
Shewmr4_2422 CDS
T00388
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
she
Shewanella sp. MR-4
Pathway
she02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
she00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shewmr4_2422
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_2422
Enzymes [BR:
she01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Shewmr4_2422
Transporters [BR:
she02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Shewmr4_2422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
DEAD
AAA_29
AAA_16
nSTAND3
RsgA_GTPase
ABC_ATPase
AAA_24
APS_kinase
G-alpha
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ABI39493
UniProt:
Q0HHH4
LinkDB
All DBs
Position
complement(2883871..2885676)
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AA seq
601 aa
AA seq
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MTASPKDEMWTVFKRLLGYLKPMKGMFLLSVCGLIVYGLVDAAFISFIGPFIDKGFSSST
PAISNGIALPTSQGFHADNQVLLMAPIVVILMFSLRGFANFVSTYGISYMSARLIMDMRQ
QVFEHYLSLPVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDGVTVIGMLGLMFY
NSWKLSLCILVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLAFGG
QETETARFAKINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAASLDSMKADLTAG
TFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTLPESDTGTYTVKRAKGNL
RFDNVSFSYEGQERRALDKIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTGLESGDIK
LDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYAYPGEATREQIIQAATLAHAME
FIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQQ
GLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLELGGMYAKLYQMQFG
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatctcctaaagacgaaatgtggacagttttcaaacgattactgggctatctc
aaaccgatgaagggcatgtttttgctttcagtttgcggcctgattgtatatgggcttgtt
gacgcagcctttatttcctttattggtccttttatcgataaaggcttttccagcagtaca
ccagcgatcagtaacggtattgcactccccactagccaaggctttcatgccgacaatcag
gtgctattaatggcgccgatagtggttattttaatgttctccttacgtggctttgcaaac
ttcgtgtccacctatggtatctcctacatgagtgcccgtttgatcatggatatgcgccaa
caagtgtttgaacattatctgagcttgcccgtgagctacatggataaggaaaacaccggt
aatctgatttcaaaagtcacctttgacaccgaacaaattgcccgagcatcaggcagcgcc
ttgatttcaatcgtgcgtgacggtgtaactgttatcggtatgttggggttgatgttttat
aactcttggaaactttccctctgtatcttagtgattggtccgattatggggctagtgatc
actattgtgagtcgtcgtttccgaaaggtgtcaaaacaaattcaaacggcgatgggcgat
gtcagtgcggcaaccgagcagatgatcaaaggccataaaaacgtgttggccttcggtgga
caagaaaccgaaacggctcgctttgccaaaattaatgacagaaaccgtcatcaaaatatg
aagcttgcggtcgcgcaagcggttagccagccgcttattatggtgattggctcctttgcc
ttggcttttgtactctatgcggcgagcctcgatagcatgaaagccgatctgaccgcgggt
accttcgcgactattctcggtgccatgatggcaatgctacaacccatcaaaaacctcacc
cgagtaaatgccgaatttcagcgcggtattgcggcctgtaccacggtttttgaattgtta
gacactctgccagagtccgataccggaacctatactgtcaagcgcgctaagggtaactta
cgtttcgataatgtctctttcagttacgaagggcaggagcgtcgcgccttagataaaatc
gattttgaagtcactcaaggtcaaaccttagccttggttgggcgttctggctcgggtaaa
tctacgatcgccagtctagttacgcgtttttacacaggcttagaatctggtgatatcaag
cttgatgatgtgagtatttatgattactcattgaaatcattacgtagtcaagtggcttta
gtttcgcagcaggtaacactgtttaacgataccattgccaacaacatcgcctatgcttat
cccggtgaagcgacccgagagcagattattcaggcggcaaccttggcccatgcgatggaa
tttatcgagcaattgcccgaggggttagatacacaagtgggcgaaaacggggtgttatta
tcgggcggccagagacaacgtatcgcgattgcccgcgctatgctgcgtgatgcgccagtg
ctgatcctcgatgaggccacttcggcactcgataccgaatctgaaaaggccattcagcag
ggtctagacaatttacgccagaatcgtacttctgttgtgattgcccaccgcttatctacc
attgaaagtgccgatcaaattttagtggtagatcaaggccgtatcgttgagcggggtacc
cataaatccctgctggaacttggcggtatgtatgccaagttataccaaatgcagtttggt
agctaa
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