Shewanella sp. MR-4: Shewmr4_2536
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Entry
Shewmr4_2536 CDS
T00388
Name
(GenBank) transcriptional regulator, DeoR family
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
she03000
]
Shewmr4_2536
Transcription factors [BR:
she03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Shewmr4_2536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
Sigma70_r4
Sigma70_r4_2
CggR_N
FaeA
HTH_28
Rrf2
HTH_23
HTH_Mga
HTH_Tnp_ISL3
FeoC
HTH_AsnC-type
PaaX
Put_DNA-bind_N
Sigma70_ECF
DUF6847
Peptidase_M29
HTH_psq
HTH_22
EAP30
Motif
Other DBs
NCBI-ProteinID:
ABI39607
LinkDB
All DBs
Position
complement(3018588..3019373)
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AA seq
261 aa
AA seq
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MSTLNTIERQQEIVRMTQLQGKVSVAELAEHFGVSEVTIRSDLAMLDQKQLLVRSRGGAM
VNSELIRELSLKEKGSCHSALKQELGKAAAALVQNGDRLLLDSGTTTQQVAANLMEHKDL
IVMTNGLNIATELAKADEVEVMLTGGLLRKKSLSFYGNIAENSLRDYNFNKLILGVDGFD
LRVGLTTHFEKEASLNRMMCEIASEIIVVTDSSKFDQQAFHVICSSRRITRLVTDTGIPE
RYVDELTKQGVQLHLIEKANL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgagtactttgaacacgatagaaaggcagcaggaaattgtgcgaatgacacagttacag
ggaaaggtctctgttgccgaactcgcagaacactttggggtatctgaagtcacgatccgc
agcgatttagccatgttggatcaaaagcagttactggtgcgctcccggggcggcgctatg
gtcaacagcgagttgatccgggagttatcactgaaggagaagggcagttgccattcggcc
ttaaagcaagagttaggtaaggccgcggcggccttggtgcaaaacggcgatcgcttattg
ctcgactcggggacgaccacccaacaggtggcggcgaacctgatggagcataaggatctg
atcgtgatgaccaatggcctgaatatcgccaccgaattggctaaggctgacgaagtggag
gtgatgttaaccggcgggctgttacgtaaaaaatccctgtcgttctacggcaatatcgcc
gagaacagcctgcgggattacaactttaacaagttgattttaggggtagatggtttcgat
ttgcgggtgggattaaccactcactttgaaaaagaggccagcctcaaccgaatgatgtgt
gagatagcgagtgaaattatcgttgtgactgactcatcaaagtttgatcaacaagcattc
cacgttatttgcagcagtcgccgtattacgcgcctagtgacagataccgggatcccagag
cgctatgttgatgaattaactaaacaaggtgtgcaattacacctcattgagaaagctaat
ttataa
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