Shewanella sp. MR-4: Shewmr4_2620
Help
Entry
Shewmr4_2620 CDS
T00388
Name
(GenBank) SNF2-related protein
Organism
she
Shewanella sp. MR-4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
ABI39691
LinkDB
All DBs
Position
complement(3117228..3120476)
Genome browser
AA seq
1082 aa
AA seq
DB search
MNRLSPQEPIQLTQTAIESLFTPPTLMRARDYVMQGRVLSAKANADFRHIEGTVTGTETT
PYRQDIRLVSVNHKLVMNGFCSCPASGNCKHMAAVLYSLLTDKTVEDQRIAQWLHLLDEA
DDPNVNDVESLYDDRVLYILSKDDNGVFIELRRGKLGKKGGYNKGTKIALSDVQYYMPAW
IGAEDVLILNLIMSTRRHGASRLYLKAQLGAVAIEKMLATERCFWEESRLALTAGEAITP
QFLWQDIDSEHKQMRLVLPERDNWELVPTEPPYYIELDYFHIGLIDTDISVDKLRLLSQM
PPVPSTQVELVSHRLIKHFSARTVPPPSAIDFVELRDKLQLRLTLKVVPAGTMPPGSALS
SATETRIAQPYLALEFVYGDLVLSGNAAKEALTLVTQGGTTYQINRALEEELQAVSKLQT
LGFSRFSLEGAANGASLWSLGHLPDAIREWLAFIDEEVPRLQTQGIEVRLAPEFSLKVVD
TPLTVELDDSQEGWFSLSLHADINGQRLPMLPLVATWLKQHGEPADDAELLLPSPSGEWL
KIKASVIKPLMSIIQELFEQHRGHSIAIPKYRAHLLNELAESEISLLNGERVRQLATKLA
EFNGVVAVSAPTGLNAQLRAYQQQGLNWLCFLKEYQLGGILADDMGLGKTIQTLAFLLKQ
QEAKSAGQPRLPSLIICPTSLVGNWAKEAAKFAPSLSLAVIHGAQRGPLLSRLSEFDVVV
TTYPLMVRDYDYYQTQPFEHIVLDEAQQIKNAQAKVSQQIKALQAPFRLCLTGTPLENHL
GELKSLMDFCLPGLLGTTAYFNKAFRYRIERYGDGEQAKVLSQRIAPFVLRRTKAEVVTE
LPPKTEIYQTLELEKDQRNLYESIRLSMEKKIRELFASQGVAGSHIEFLDALLKLRQACC
DPRLVKLEQAQKVKNNAKLNWLSQNLPEMVQEGRKILIFSQFTSMLILIEELLQSLDIDY
SKLTGQTRLRQGQIDKFQEGDTPVFLISLKAGGTGLNLTAADTVIHYDPWWNPAAEKQAT
DRAHRIGQENPVFVYKLIAEGTVEEKIQEMQQHKQGLADSILEGKGKGAWQGSADELLSL
FH
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcttgtccccccaagagccaatccaattgactcaaacggctattgagtcctta
ttcacgccgccgacactgatgcgcgcccgtgattatgtgatgcaggggagggtgttaagc
gcgaaagccaatgccgattttcgccatatcgaaggcacagtcacgggcacggaaaccacg
ccctatcgtcaggatattcgtctggtcagtgtcaatcataagctagtgatgaatggcttt
tgttcctgccccgccagcggcaattgcaagcatatggccgcggtgctctacagtctgctt
acggataagaccgttgaggaccaacgtatcgcccagtggttacacctactcgatgaagcc
gatgatcccaatgtgaatgatgtcgaatccctctacgatgacagggtgctgtatatcctt
tcaaaggacgataacggggtgtttatcgagcttaggcgcggcaagcttggcaagaagggt
ggttacaacaagggcactaagattgcgctctcggacgtgcaatattatatgcccgcttgg
attggcgccgaggatgtgctgatcttaaatcttatcatgtcgaccagacgccacggcgct
tcgcgcctgtatcttaaggcgcagttaggggcggtagcgattgagaaaatgctcgccacc
gagcgctgcttctgggaggagagccgcctcgcattaaccgcgggcgaggccattacaccg
caatttctctggcaagatatcgacagcgagcacaagcaaatgcgcctagtcttgcccgag
cgggataactgggaactcgtgccgacagagccgccttactatatcgaactggattatttt
cacataggccttatcgataccgacattagcgtcgataagctgcggctacttagccaaatg
ccgcccgtgccgagcacccaggttgaactggtgagccatcgactgatcaagcatttttcg
gcgcgcactgtgccgccgccaagtgcgattgattttgttgagctaagagataagttacag
cttcgtttgacgcttaaggttgtccccgcaggcacaatgccacctggcagcgctctgtca
tctgcaacggagacccgcatcgcccagccgtatctggcgctggagtttgtctacggagat
ctcgtcttaagtggcaatgccgccaaagaagcattaaccctagtgactcaaggcggcacc
acctatcagataaaccgcgcgcttgaagaagagctgcaagccgtatcaaagctgcaaacc
cttggctttagccgcttttccttggagggcgctgcaaatggggcttccctttggagctta
ggtcacttgcccgatgcgattcgggaatggctagcgtttatcgatgaagaagtcccaaga
ttacaaactcaaggcatagaggtgcgattggccccagagtttagccttaaggtggtcgat
acgccgttaacggttgagctggatgacagccaagagggctggttctccctgtcgttgcat
gccgatatcaatggtcaacgcttgcctatgttgccgctggtggcaacttggttaaaacaa
catggcgagcccgccgatgatgctgagttattgctacccagcccctctggcgaatggctt
aaaattaaagccagtgttatcaaacctttaatgagcattattcaagagttgtttgagcag
catcgcggccacagtatcgccatacctaagtaccgtgcgcatttactcaatgagttagcc
gaaagcgagattagcctgctcaatggtgaaagggtgcgtcagctcgcaacaaagttagcc
gaatttaatggtgtggttgcggtcagtgcgccgacaggactgaatgcacagctgcgggct
tatcagcagcaaggcctaaattggctttgttttttaaaggaatatcaactcggcggcatc
ttagccgacgacatggggcttggaaaaaccattcaaaccttggcgtttctgttaaagcag
caggaggctaaatcagcagggcagccaagattgccgagcctgattatttgcccaaccagt
ttagtggggaactgggcgaaggaggcggccaagtttgcgccgtcgttaagtttggcggtg
atccatggcgcccagcgtgggccgctgttatcgcgattaagcgagtttgatgtcgtcgtc
acaacttatccccttatggtgcgggattacgattattaccagactcagccgtttgagcat
atagtgctcgatgaggcgcagcagattaaaaacgcccaagccaaagtgagccagcaaatt
aaggcgttgcaagcgccgtttagactctgccttaccggcacgccccttgagaatcattta
ggtgaactcaagtcattgatggatttttgtttaccgggactcttgggaacaaccgcctat
tttaataaggcgtttcgctatcggattgagcgttatggcgatggcgagcaggcgaaggtg
ttgagtcaacgcatcgccccctttgtgttaaggcgcaccaaggccgaggtagtgactgag
ctgccacctaaaaccgagatctaccaaaccctagagcttgagaaagatcagcgtaatcta
tacgaaagtattcgcctgagtatggagaaaaaaattcgagaattatttgcaagccaaggc
gtggcgggcagtcatatcgagtttttagatgccttgctcaaattgcgccaagcctgctgc
gatccgcgattagtcaaactcgagcaggcacaaaaggttaaaaataatgccaagttaaac
tggctgagccaaaacctgccggaaatggtgcaggaaggtcgcaagattttaatcttcagc
caatttaccagtatgttgatattaattgaggaattgctgcaatccctcgacatcgactac
agcaaactgacggggcaaactcggctgcgtcaggggcaaattgataagttccaagaaggc
gatacgccggtatttttaatcagcttaaaggcggggggcacagggcttaatctcactgcg
gcggatacggttatccactacgatccttggtggaatccggcggcagaaaagcaagcgacg
gatagggcgcaccgcattggccaagaaaatccagtgttcgtttacaagctgattgccgaa
ggcacggtcgaagagaaaatccaagaaatgcagcagcataagcaaggtttagcggatagt
attctcgaaggaaaaggcaaaggcgcgtggcaaggcagtgcagatgaattgctctcgcta
ttccactag
DBGET
integrated database retrieval system
