Shewanella sp. MR-4: Shewmr4_2666
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Entry
Shewmr4_2666 CDS
T00388
Name
(GenBank) beta-ketoacyl synthase
Organism
she
Shewanella sp. MR-4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
PP-binding
Ketoacyl-synt_C
Acyl_transf_1
KR
adh_short
KAsynt_C_assoc
PKS_DH_N
Motif
Other DBs
NCBI-ProteinID:
ABI39737
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All DBs
Position
3170335..3178308
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AA seq
2657 aa
AA seq
DB search
MSHTPSQPQLSTDEKADKRLNKRLKDMPIAIVGMASIFANSRYLNKFWDLICDKIDAITD
VPESHWSIDDYYDADKSKADKSYCKRGGFMPEVDFNPMEFGLPPNILELTDSSQLLSLVV
AKEVLQDANLPDDYDRDRIGITLGIGGGQKLSHSLNARLQYPVLKKVFKSSGLSDEDSEL
LIKKFQDQYVHWEENSFPGSLGNVIAGRIANRFDLGGMNCVVDAACAGSLAAMRMALTEL
TEGRSDMMITGGVCTDNSPYMYMSFSKTPAFTTNEQIQPFDIDSKGMMIGEGIGMVALKR
LDDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALERAYDDAGFAPHTVGLIEA
HGTGTAAGDVAEFNGLTSVFSKDNEQLQHIALGSVKSQVGHTKSTAGTAGVIKAALALHH
KVLPPTINVSQPNPKLNIARSPFYLNTEARPWIQRSDDTPRRAGISSFGFGGTNFHLVLE
EYHPEHARDDAYRQRSVAQSWLFAAADKTTLLGELKTALQQATAAKAELSDAHFVAFAKA
YALRELAPQSARLGFIAKDYAQLQTLLTQAIAQLESNSAESWQLPSGISFRAQALVKDNN
KVAALFAGQGSQYLNMGLEIANNFPELRRHIHASDKVFSDRGEATLSSVLYPIPAFDDES
RKAQESALTNTLYAQSAIGAISMAQYALLTQAGFAPDMLAGHSFGELSALCAAGVISMDD
YIKLAFERGQAMAQSPQDADSSRDAGVMYAVILKQKQDIEAINDCLAQFDGVKIANYNSP
TQLVIAGATTATQQAAKAIGELGFKAIALPVSGAFHTPLVAHAQKPFSEAIDKAQFNTPK
IALYANGTGELHPSDANAIKAAFKDHMLQSVHFSEQLEAMYAAGARVFVEFGPKNILQKL
TENTLAAQLNELCLISINPNPKADSDSQLRSAAVQLAVAGVPLGEIDPYQAELIAPATPS
AMNIKLNATNYISPATRNKMVDSLQSGKITSQVQYVDRLVEKVVEKVVEKPVIVEKILEK
VVEVEKPVAQNNNNIQQQTPAQPASFTTGQANQDALSAFFSAQTQAAQLHQQFLAIPQQY
GDTVSALMAEQAKMASLGIAIPESLQRSMELFHQHQTQTLKSHAEFMQLQTSSSQAALAL
LGQMPAPQVQVPIQTAPVAVAPVAVTAAKPVVPAQAPVVQALVTEPKATIAPVSEPQVPQ
PQVQQPQVTQSQVAQPQVQTVAAATRALSEKSVVQQIETAMLAVVADKTGYPVEMLELSM
DMEADLGIDSIKRVEILGTVQDELPNLPELSPEDLAECRTLGEIVTLFSQAAPVTAAASV
SHATQNAVPVTVSHATQSAVAVSAAVSNDEIERTMMAVVADKTGYPVEMLELSMDMEADL
GIDSIKRVEILGTVQDELPNLPELSPEDLAECRTLGEIVALFSQAAPVPASATVSHATQN
AVVASAVAAGAAVSNDEIERTMMAVVADKTGYPVEMLELSMDMEADLGIDSIKRVEILGT
VQDELPNLPELSPEDLAECRTLGEIVALFSQAAPIVSTAVTAAASVSHATQNAVLASAVA
TSAAVSNDEIERTMMAVVADKTGYPVEMLELSMDMEADLGIDSIKRVEILGTVQDELPNL
PELSPEDLTECRTLGEIVTLFSQAAPVTAAASVSHTTQRAVAASAALSNGEIERTMMAVV
ADKTGYPVEMLELSMDMEADLGIDSIKRVEILGTVQDQLPNLPELSPEDLAECRTLGEIV
ALYAGSQPSSEAPQQNHAAPIQEIQEATTETVEETIDLPPHSEVMLKKLPAAAELARIIA
TSDVQLTANSYVVIGDDGHNAGVIAEKLHAQGVKVAVVRSPKTVVTSASPLDSHIASFTL
EAIDDESICEVINQIEALGQIAGFIHLQPQHKSDVDKGAGLVLADDAKALVEQAFLFAKH
LQPLLTERDHCRFVTVSRIDGGFGYIGMDESAGAVISLSELNQAALSGLTKTLNHEWPGV
VCRALDIAPNLDAKTVANAVVQEYYLQDAPVEVGIDSELERTTLVAGNAVLRRSGASLSS
ADKILVTGGAKGVTFECALSLAKRCKAHFILAGRSAHQGIPAWAQGKNRNELKAAAIAHL
QSLGDKPTPKQVDALVWPVQSSLEISHALQAFEAVGASAEYLSLDVNDPDAIASTIAPIS
ALSPITGIIHGAGVLADKHIQDKTLSELERVYGTKVTGLNNLLSTLDLSQLTLIALFSSA
AGFYGNTGQSDYAMSNDILNKAALQLAQQLPQAKVMSFDWGPWDGGMVNPALKKMFIDRG
VYVIPLKAGAELFASQLLSDTGAQLLVGTDMQGNTANTVEAASAKKPEADLTTALDPQPM
AQTVPQSIRVMRSLDPKRMSFIEDHCINGHAVLPTVCAIDWMREAAKAHLGKAVSVSDYR
LLKGIIFDEVLLARDAPIELELMLTPLADATQQSTEALTALISFEGRPQYQAVLVAQTDD
TADVQRFEVDELHSLMQEMAQQPAIANRESLYSDGTLFHGPRLQGISEVLAFDDQQLIAK
VALPTVALDDCGEFAPNLENKGTQPFAEDLLLQAMLVWARLKYQAASLPCAIGEFVSYSP
LGFGEKAVLVLDVLKHSSRTLEANIALYHQDGRLSCEMKRAKVTVSKTLNQAFLANKPQQ
QTQEQAVAQSSAEVSVK
NT seq
7974 nt
NT seq
+upstream
nt +downstream
nt
atgagccataccccttcacagcctcaattatcaaccgatgaaaaagccgataagagactg
aataaacgcttaaaagatatgccgattgccatcgttggcatggcgagtatctttgctaac
tcccgctatttgaataagttttgggatttaatttgcgacaaaattgatgccattaccgac
gtgcccgaatcccactggtcgattgatgactattacgatgcggataagtccaaggccgat
aagagctactgcaaacgcggtggttttatgccagaggtggacttcaatccgatggagttt
ggtctgccgcccaatattttggaactcaccgacagttcgcagttactctcactggtcgtc
gccaaggaagtcctacaggatgccaatttgccagacgattacgaccgtgaccgtatcggc
atcacactcgggattggcggcggtcaaaaactaagccatagcctcaatgcacgcctgcaa
tatccagtgctgaaaaaagtatttaaaagcagtggcctaagcgatgaagatagcgaactg
ctgatcaaaaaattccaagatcaatatgtccactgggaagaaaactctttccccggctcc
cttggtaacgtgattgccggacgcatcgccaaccgtttcgatttagggggaatgaactgc
gtcgtcgatgccgcctgcgcaggctcgcttgccgccatgcgtatggcgctgaccgaactg
accgaaggtcgcagcgacatgatgattaccggcggtgtctgtaccgacaactcaccctac
atgtatatgagtttctcaaagacgccagcctttaccaccaacgaacagattcaacccttc
gatatcgactctaagggcatgatgattggcgaagggattggcatggtcgccttaaaacgc
ctcgacgatgccgagcgcgatggcgaccgtatctacgcggtaatcaaaggcgttggcgca
tcatcggacggtaaatttaagagcatttatgcgccgcgccccgaaggccaagccaaggca
ttagagcgcgcctatgatgacgctggctttgcgccgcacacagttggcttgattgaagcc
cacggcacaggcacagcagcaggtgatgtagccgaattcaatggcttaacctcagtattc
tcgaaggataatgagcagttacagcatatcgccttaggctcagttaaatctcaggtcggt
catactaagtccaccgcgggcacggcgggtgtgattaaggctgcattggcgctgcaccat
aaagtcttgccgccaacaattaacgtcagtcagcctaaccctaaattaaacattgcccgc
tcgcccttttatctcaataccgaggcgcgcccttggatccaacgcagtgacgatacgccg
cgccgcgcagggatcagctccttcggttttgggggcactaacttccatttagtgctcgaa
gaatatcacccagagcacgcgcgcgatgacgcctatcgccagcgcagcgtggcgcaaagc
tggctgtttgccgccgccgacaaaaccacgttgcttggcgagttaaaaaccgcgctacag
caagcaactgcggccaaagcagaactttctgatgcccattttgttgcctttgcaaaagcc
tacgccctgcgtgaactagcaccgcaatcggcccgtcttggctttattgccaaggactat
gctcagttacagactctgttaacccaagcgatagcgcagctagaatccaatagcgcagag
agctggcagttaccctcagggataagttttcgcgcccaagcgctagtcaaggataacaac
aaggttgcagccttatttgccggccaaggctcgcaatacctgaatatgggactggaaatt
gccaacaacttccccgagcttcgtcgccatatccacgccagcgataaagtgtttagcgac
cgtggtgaagcgacgctttcaagcgtgctgtacccaatccccgccttcgatgatgaatcg
agaaaagcacaggaaagtgcgttaactaataccctttatgcccaaagcgctatcggcgcg
atctctatggcgcagtacgccctgttgactcaggcgggtttcgccccagatatgctcgca
ggtcatagctttggtgaactctcggctctgtgcgccgcaggcgttatctctatggatgac
tacatcaagctggcctttgaacgtggacaggcaatggcgcagtcacctcaggatgccgac
tccagtcgtgatgctggcgtcatgtatgccgtcattcttaagcaaaaacaagatattgag
gctatcaacgattgcctagcgcagtttgatggcgtcaagattgccaactacaactcaccg
actcagctggtgattgcaggcgctaccacagcgacacaacaggccgctaaggccattggt
gagttaggctttaaggcgatagccctgcccgtttctggcgccttccacacgccattggtt
gcccatgcgcaaaagccttttagcgaagccatcgataaggctcaattcaacacgccaaag
attgccctgtatgccaatggcacaggcgagctacaccctagcgatgccaatgccatcaaa
gccgcctttaaagatcatatgctgcaatcggtgcactttagcgagcagctagaggccatg
tatgccgctggcgcacgggtgtttgtcgagttcggcccgaaaaacattctgcaaaagttg
acagaaaataccttagccgcgcagttaaacgagctttgccttatcagcattaacccgaac
cctaaagctgattccgacagccaactgcgcagcgctgcggtgcaactggcggttgcgggg
gtaccactaggggaaatcgacccttatcaagccgaattgattgcgccagcaacgccttcg
gccatgaatatcaagctcaacgcgaccaactacatcagcccagcgacccgcaacaaaatg
gtcgattcgctgcaatcgggcaaaataaccagccaagtgcagtatgtggatcgcctcgtt
gagaaagtggttgaaaaagtcgttgaaaaaccagtgattgtcgaaaaaattctagaaaag
gttgtcgaagtggaaaagccagtggcacaaaataacaataatattcaacagcaaacgcct
gcacagccagccagctttaccactggacaggcgaatcaagatgccctgagcgcctttttt
tccgcccaaacccaggccgcgcaattacatcaacaatttttagcgatcccgcagcagtac
ggcgataccgtcagtgccctgatggctgagcaagccaaaatggcaagccttggcatcgcc
attcctgagagcctgcaacgttcgatggagctgttccaccagcatcagacacaaacccta
aagagccatgctgaatttatgcaattgcagaccagcagcagccaagcggcattagccctg
ctcggccaaatgccagcgcctcaggttcaagtccccattcaaacggcaccagtggcggtt
gcaccagtggcagttacagcggcaaagcctgtcgttccagcacaggcacctgtggttcaa
gcgttagttacagagcccaaagcgactattgcgcctgtgagtgagccccaagttccgcaa
ccccaagttcagcaacctcaagtaacacaatcacaagtcgcacaaccacaagtacaaact
gtggcggcagcaactcgcgcgctttccgaaaagtcagtcgtgcagcaaatcgagacagcc
atgctggcagtggttgccgataaaacaggctatcccgtggaaatgttagaacttagcatg
gatatggaagccgaccttggtatcgattccatcaagcgcgtggaaattctaggtacagta
caggacgagttacctaacctgccagaactgagcccagaggatttagccgagtgtcgcacc
ctaggggaaattgtgacgctgtttagccaagcagctcctgtaacagctgcggcctcagtt
agccatgcgacacaaaatgcagtacctgttacagtaagtcatgcgacacaaagtgcagtc
gctgtaagtgcggcggtttctaatgatgaaattgaacgcactatgatggcggtggtagcc
gacaagacaggctatcccgtggaaatgctggaactcagtatggatatggaagccgatctt
ggtatcgattccattaagcgcgtggaaattctaggcacggtacaagatgaattaccgaac
ctgccagaactcagccctgaagatctcgccgagtgtcgcaccctaggggaaattgtcgcg
ctctttagccaagcggctcctgtacccgcttctgccacagttagccatgcgacacaaaat
gcagtagtcgcaagtgcagtagctgctggtgcggcggtttctaatgatgaaattgagcgc
actatgatggcggtggtggccgacaagaccggctatcccgtggaaatgctggaactcagt
atggatatggaagccgaccttggtattgactctattaagcgcgtagaaatcctaggtaca
gtgcaggatgaattaccgaacctgccagaactgagcccagaagatttagccgagtgtcgc
acccttggagaaattgtggcgctctttagccaagcggctcctatagtatcgacagccgta
acagctgcagcctcagtgagccatgcgacacaaaatgcagtactcgcaagtgcagtagct
acaagtgcggcggtttctaatgatgaaattgagcgcactatgatggcggtggtagccgac
aagactggctatcccgtggaaatgctggaactgagcatggatatggaagctgaccttggt
atcgattctatcaagcgcgtcgaaattctaggcacggtacaggacgagttaccgaacctg
ccagaactgagcccagaggatttaaccgagtgccgcaccctaggggaaatcgtgacgctc
tttagccaagcagctcctgtaacagctgcagcctccgttagccatacaacacaaagagca
gttgctgcaagcgcagcgctatctaatggcgagattgaacgcactatgatggcggtggtg
gccgacaagaccggctatcccgtggaaatgctggaactgagcatggatatggaagccgac
cttggtatcgattctatcaagcgtgtggaaattttaggcacagtacaagatcaactgcca
aacctgccagaactcagcccagaggatttagccgagtgtcgcaccttgggtgagattgtc
gccctctatgctggttcgcaaccatcaagtgaggcgccacagcaaaaccatgctgcacca
attcaagagattcaagaggcaactactgaaaccgtcgaggaaaccatcgacctgccgccc
catagtgaggtgatgctaaaaaagttgccagcggcggctgagttagcgcgcatcatagca
actagcgatgttcaactgacggcaaacagttacgtcgttatcggcgacgatggccacaac
gcgggggtgattgccgaaaagcttcacgcccaaggcgttaaggtcgcggttgtacgctca
ccgaaaacggttgtgaccagcgcatcgccactcgatagccatattgccagcttcacgctg
gaggcgattgatgatgaaagcatttgtgaggtcatcaatcagattgaagcgcttggccaa
atcgctggttttattcatctgcagccacaacataagtccgatgtggataaaggtgctggc
ttagtgctggcagacgacgccaaagccttggtcgagcaagccttcttgttcgccaaacac
ttacaaccgctgttaactgagcgcgaccactgccgctttgtcaccgtcagccgtatcgac
ggtggctttggctatatcggcatggacgagtcggctggcgctgttattagcctgagtgaa
ctcaaccaagcggcgctctctggactcacgaaaaccttaaatcacgaatggccgggagtg
gtttgccgcgcgctggatatcgcgccaaacttggacgctaaaacggtcgccaatgcggta
gtgcaggaatactacctccaagatgcgccagtcgaagtcggtattgatagcgagcttgag
cgcaccaccttagttgcgggcaatgccgtgcttcgccgcagtggcgcgtctctctcgtct
gcggacaaaatcctcgtcacaggcggcgctaagggcgtcaccttcgagtgcgccttaagt
ttagcgaaacgctgcaaggcacattttatcctcgcgggtcgcagcgcccatcaagggatc
cccgcttgggctcagggtaaaaatcgcaacgagctgaaagccgctgccattgcacatttg
caaagcctgggtgataaacccacaccaaaacaagtggatgccttagtttggccagtacaa
agcagccttgaaatcagccatgccttacaggcctttgaagcggttggcgccagcgccgaa
tacttaagcctagatgttaacgatcctgacgccattgccagcactattgcgcctatcagc
gccctatcccccatcacggggattatccacggcgcgggcgtacttgccgataaacatatt
caagacaaaaccttaagcgaacttgaacgcgtttatggcactaaggtgaccggacttaac
aatctgctgtcaacgctggatcttagccagttaacgctcatcgccctgttctcttctgcg
gcgggtttttacggcaatacaggccagagcgactacgccatgtctaacgacattctcaac
aaggccgcgctgcaactcgcgcagcaattgccgcaagccaaggtgatgagctttgactgg
gggccttgggatggcggcatggtcaatcctgcgctgaaaaagatgtttatcgaccgtggg
gtctatgtcattccactcaaagccggtgccgagttatttgccagccaattattgagtgat
acgggagcgcagctgttggtcggaaccgatatgcagggcaataccgctaatactgttgaa
gctgcatcagcaaaaaagcctgaagcggatctaaccacggcgttagatccgcagcctatg
gcccaaacggtgccgcaaagtattcgcgtcatgcgcagcctcgatcctaagcgcatgagc
tttattgaggatcattgcatcaacggtcatgcggtgttgccaacggtatgcgccatcgat
tggatgcgtgaggccgccaaggcccatttaggtaaggcggtgagtgtcagcgattatcga
ctactcaagggaattatcttcgatgaggtactacttgcccgcgatgcgcctattgagctc
gaactaatgctcacgccgcttgccgacgctacacagcaatcgactgaggccttaaccgcg
ctgataagctttgaaggtcgcccgcagtatcaggcagtgttagtggcgcagacggatgat
acggcagacgtgcagcgtttcgaggttgacgagttacattctctgatgcaggagatggca
cagcaacccgctatcgcgaaccgtgagtcgctctacagcgatggcaccctgttccatggc
ccaagactgcaaggtataagcgaagtgctcgcctttgatgatcagcagcttatcgctaag
gtagcactgccaacggtggccttagatgactgcggtgagtttgcgccaaatcttgagaat
aaaggcacacaaccctttgccgaagatctgttattgcaggccatgctcgtgtgggcgcgc
cttaaatatcaagcggcaagcttaccctgtgccattggtgagtttgtgtcctattcgccc
ttaggttttggcgagaaggcggtattagtgctggatgtactcaagcattcatcccgaaca
cttgaagccaatattgcgctttatcatcaagatggccgattaagctgcgagatgaaacgg
gccaaggttacggtcagtaagacgctcaaccaagcgtttttggccaataaacctcagcaa
caaacgcaagagcaggcagtcgcccaaagctcggccgaggtaagtgttaagtga
DBGET
integrated database retrieval system