Shewanella sp. MR-4: Shewmr4_2729
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Entry
Shewmr4_2729 CDS
T00388
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
she
Shewanella sp. MR-4
Pathway
she03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
she00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Shewmr4_2729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
she03400
]
Shewmr4_2729
Enzymes [BR:
she01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Shewmr4_2729
DNA repair and recombination proteins [BR:
she03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Shewmr4_2729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TACC_C
DUF6687
DUF6730
Motif
Other DBs
NCBI-ProteinID:
ABI39800
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All DBs
Position
3257890..3258129
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AA seq
79 aa
AA seq
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MAKKPENLSFEESLGELERIVAELEQGDVSLDDALKQFERGINLVRNSQAKLEQAQQKVA
ILLKQDENAPLSPYAVEGE
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagaaacccgaaaatctcagttttgaagaatcccttggtgaactcgagcgcatc
gttgccgaattagaacagggcgatgtctctctggatgatgcgttaaaacaatttgaacgt
ggcatcaatctggtgcgtaacagccaagcaaaactcgagcaagctcagcaaaaagtggcc
attttactcaagcaggatgaaaatgcgcccctctctccctatgccgttgagggcgaataa
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