Shewanella sp. MR-4: Shewmr4_3035
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Entry
Shewmr4_3035 CDS
T00388
Name
(GenBank) WD-40 repeat protein
Organism
she
Shewanella sp. MR-4
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_NWD2_C
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_ACSF4
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-ProteinID:
ABI40106
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Position
3630072..3631022
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AA seq
316 aa
AA seq
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MKKTLLLVFCTIFLVACQPKADDIRVLSQEPSYSASLSSDGNIAIVATQSQGVQCWDLTT
HSLKYQWVHGDLNTGVTATAISPNGQFAASLSRDSVALWTIADGKSSGWWSLPASGESVA
VANNGALLIGLNDGSVMSLNAAKTALIKFLGHKERVNTVALSADGRIALSGSNDMQAILW
QAQTGQPIHTWDIGSRVTKVALNDSGTLSFTNGSTNEAKVRDNNSGKVLNQLEIYRRQMT
FSAVRFTKQDSQLLTGTPAREVILWQRQTGKPIAKWQIALTKNTQNRGAVVYSVAIRDTN
KVVSISSQGLVETWQE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaccctactgctggtattttgcacaatttttttagtggcatgtcagccaaaa
gccgatgatattcgtgtactttcacaggaaccatcatacagcgcgagcctctctagcgac
ggcaatatcgccattgtcgccacccaaagccaaggggtgcaatgttgggacttaaccacc
cacagcctcaagtaccaatgggtgcatggcgacctgaatactggcgtcaccgcaaccgcc
atttcccctaatggccagttcgccgcatcgttaagccgcgattcagttgccctatggaca
atagccgacggcaaatccagtggatggtggtcactccccgcctcgggtgagagtgtcgcc
gtggccaataatggcgccctgctcattggcttaaacgatggcagcgtgatgtctctcaat
gcagccaaaaccgcactgattaaatttttaggacataaagagcgagtcaatacggtcgca
ctttccgccgatggtcgcattgccctctcaggctccaacgacatgcaggctatcctgtgg
caggcgcaaactgggcagcctatccacacttgggatatcggtagtcgagtgactaaggtc
gcgctcaacgacagcggcacattaagctttaccaatggcagtaccaatgaggcgaaagtg
agggacaacaatagcggtaaagtgttaaatcaactagagatataccgtcggcaaatgacc
ttttctgcggtgcgctttaccaagcaagacagccagctgctcacgggcacgcccgcgcgc
gaagtcatactctggcaacgtcaaacgggtaaaccaattgctaagtggcaaattgcgctg
actaaaaacacccaaaaccgaggagccgttgtatactctgtggcaattcgcgataccaat
aaagtggttagtatcagtagccaaggcctagtagagacttggcaggagtag
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