Shewanella sp. MR-4: Shewmr4_3090
Help
Entry
Shewmr4_3090 CDS
T00388
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
she03000
]
Shewmr4_3090
Transcription factors [BR:
she03000
]
Prokaryotic type
Helix-turn-helix
Other families
Shewmr4_3090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
Mg_chelatase
AAA
MCM
GAF_2
AAA_2
HTH_8
AAA_16
IstB_IS21
AAA_19
AAA_7
AAA_22
DUF815
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ABI40161
LinkDB
All DBs
Position
3697743..3699299
Genome browser
AA seq
518 aa
AA seq
DB search
MALSQTDLTRIALDITSGLAHRDRFSRLLDTVRANLHCDAAALLTFHGHYFTPLAIDGLN
EDVLGRRFILNEHPRLEAIARAGDIVRFPADSELADPYDGLIPNQTGALKVHACIGLPLF
ADEQLIGAVTIDAFNPLQFDQFSNTELRSLSAIAAASLSNALLVEKLERMALNSHSTHVQ
EKSPNLNHDAEIIGNSPQMQSLNREIEVVAHSDLNVLILGETGTGKELVAQAIHQKSARQ
HKPLVYLNCAALPESVAESELFGHIKGAFTGAISHRSGKFEMADKGTLFLDEIGELPLTL
QAKLLRVLQYGDIQKVGDDRSLKVDVRIIAATNKDLKTEVLAGRFRADLYHRLSVFPLLV
PPLREREQDITLLSGFFAERYRQKLGMKQLNFSPSSLMLLNQYAWPGNVRELEHAIHRAT
VLARVSAQDGCCTIAPQHFDLPFKQSSVETNASTSLSVNDMQLRPLEGASLAQATDAFQR
DFIKQVLTAHNGNWAASARALGLDPGNLHRLAKRLRLK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcccttagtcaaaccgaccttacccgtatcgctctggatatcacctcaggtttagcc
cacagggaccgcttctcacgcttgctcgatacggtgagagctaacctgcactgtgacgcg
gctgcgctcctcaccttccatggacactattttaccccgctggccatcgacggtttgaac
gaggatgtactcggcagacgctttatcctgaatgagcatccaaggcttgaggccattgcc
cgtgcgggggatatagtgcgttttcccgccgacagtgaacttgccgatccctacgatggt
ttgatccccaatcaaacaggggcattgaaagtccatgcctgtatcggactgcctttattt
gccgacgagcagcttatcggtgccgtaactatcgatgcctttaatcccctacagttcgat
caattcagcaatactgagcttcgcagcttaagtgcgattgccgccgcatccttaagcaac
gccctgctagttgaaaagttggagcgcatggcgctcaatagccactcgactcatgtgcag
gaaaaaagccccaaccttaaccacgatgccgaaatcatcggtaactcgccccagatgcaa
agcttgaatcgagagatagaagttgttgcccatagcgaccttaacgtactgattttaggc
gagactggaacaggcaaagaattagttgcacaggcaatccatcaaaaatccgcgagacag
cacaaacccttggtttatctcaattgcgcagcgcttcctgaatcggttgccgaaagcgaa
ctctttggccatatcaaaggcgcgtttaccggcgccatcagccatcgcagtggcaagttt
gaaatggccgataagggcacactctttctcgatgagattggcgagcttccgctcacgctt
caggccaagttgttgcgggtattacaatatggcgatattcaaaaagtgggggatgatcgc
agtcttaaagtcgatgtgcgtatcattgccgccaccaataaggatctgaagacagaggtg
ctggctggtcgctttagggccgatctctaccatagattaagtgtgttccccctgctggtg
ccgcccctgcgggagcgtgagcaggacatcaccttgttgagcggattcttcgccgagcga
tatcggcaaaagctggggatgaagcagcttaacttcagccccagtagcttaatgttgctc
aatcaatatgcatggccgggcaatgtgcgcgagctcgagcacgccattcacagggcaacc
gtactggcgcgcgtctcggcacaggatggctgctgcaccatagcgccacaacattttgat
ttaccgtttaaacaaagctctgtagagacaaacgcatcgacaagcttaagcgtaaacgat
atgcagcttcgcccgttagaaggtgccagtttagcccaagcgaccgacgcctttcagcgt
gacttcatcaaacaagtactcactgcacataatggcaattgggccgcctcggccagagcc
ttaggactcgacccaggcaatctgcatcgcctcgcaaaacgcttaaggctaaaataa
DBGET
integrated database retrieval system
