Shewanella sp. MR-4: Shewmr4_3091
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Entry
Shewmr4_3091 CDS
T00388
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K19235
L,D-transpeptidase YbiS
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
she01002
]
Shewmr4_3091
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
she01011
]
Shewmr4_3091
Peptidases and inhibitors [BR:
she01002
]
Cysteine peptidases
Family C82
Shewmr4_3091
Peptidoglycan biosynthesis and degradation proteins [BR:
she01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Shewmr4_3091
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
ABI40162
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All DBs
Position
3699471..3700385
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AA seq
304 aa
AA seq
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MSMLRTTALLLTLVFPSLSALATEYPLPSSKSRLVGENLYYTVPEGKHTLEDIAAKFQLG
LSNLLEANPGVDPFLPTPGSKLLIPQQLILPNAPREGIVINVAEMRLYYYPKGKNTVEVL
PIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKEYAARGEILPAVWPAGPDNPMGLY
ALYIGNLYAIHGTNASFGIGLRVSQGCVRLRHDDIEHLFKTVPVGTRVQFVNQPIKATEE
PDGKRYLAVHQPLSRTIAEFESAEPVSLTLPKDIAKFIAKADTDSAVIKKLLDERTGVPT
IINQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcttcgcaccacagctttattattgactctggtttttccgagtctttccgct
ttagcaacggaataccctttaccgtcttcgaagagtcggttagttggcgagaacctgtat
tacacagtgccagagggtaaacacaccctcgaagatattgccgctaaattccaactcggt
ctaagcaacttgctggaagcaaaccctggcgtggatcctttcctaccaacaccaggcagc
aagctattaattcctcaacagctcattctgccaaatgcgccgcgtgaaggcattgtcatc
aacgtcgccgaaatgcgcctgtattactatccaaaaggtaagaacaccgttgaagtgctg
ccaatcggtattggtcagattggtaaagatacccctgaaaactgggtcaccagtgttcaa
cgtaaacgcgctaacccaacttggacaccgacaccacgtattcgtaaagaatatgcggca
aggggcgaaattctgcctgcggtatggccagcgggtcccgataacccaatgggactctac
gcgctctacattggtaacttgtatgccatccatggtaccaacgccagcttcggtattggt
ttacgtgtcagccaaggctgcgtgcgtttacgccacgatgacattgaacacttattcaaa
acggttccagtgggtacccgagtacaatttgtgaaccaaccgattaaagcgaccgaagaa
ccagatggtaagcgctacttagccgtgcaccagccactgtcgcgcaccattgccgagttt
gaatcagcagagccagtctctctgaccttaccgaaagacatcgccaagtttattgccaag
gccgataccgattcagcagtgattaaaaaactgctcgatgagcgtacaggcgtaccaacg
attattaatcagtaa
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