Shewanella sp. MR-4: Shewmr4_3178
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Entry
Shewmr4_3178 CDS
T00388
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
she03009
]
Shewmr4_3178
Enzymes [BR:
she01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Shewmr4_3178
Ribosome biogenesis [BR:
she03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Shewmr4_3178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABI40248
LinkDB
All DBs
Position
complement(3797265..3797972)
Genome browser
AA seq
235 aa
AA seq
DB search
MKLSRPVRLDKFICESTSLTRSLAKKALHRGEITCDGIVVKDSGFKVLEGMQVCLEGEPI
SLVGERYLMLNKPVDTICSTIDEAYPSVLSLLDIEKPETLHIAGRLDADTTGLVLITSDG
QWSHRITSPKKDCGKRYLVTLADPVDGSLVGIFAAGVELRNEDGLTKPAVLEIIEPQLVR
LTITEGKYHQVKRMFAAVGNHVVGLHRESIGRIELDSDLAPGEWRYLTSEEIASI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttgagtcgtccagtgcgtttagataaatttatctgtgaaagtacctcgcttacc
cgttctttagcgaaaaaagccttacaccgtggtgagattacctgtgacggtattgtggtc
aaagactctggctttaaagtgcttgaggggatgcaagtatgcctcgaaggtgagcctatc
tccctcgtcggagagcgttacctgatgcttaataagcccgtggatacgatttgctcgact
atcgatgaagcctatccatcggtattgagtctgctggatatcgaaaagccagaaacttta
cacattgctggccgtttagatgccgatactacgggccttgtgttgatcaccagcgatggc
caatggtcgcatcggatcacctcgccgaaaaaagactgtggcaagcgttacttagtgacg
ttagccgatcctgtggatgggagtttggtaggcatatttgccgccggagtggaactgaga
aatgaagatggcctgacaaagcccgcggtgcttgaaatcatcgagccacagttggtgcgt
ttaaccattaccgaaggtaaatatcatcaagttaagcggatgtttgctgccgtgggcaat
catgtggttggcttacaccgtgaaagcattggcagaattgaattagactcagatcttgcc
cctggtgaatggcgctatctgacgagtgaggaaatcgcctcgatttaa
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