Shewanella sp. MR-4: Shewmr4_3245
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Entry
Shewmr4_3245 CDS
T00388
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16090
catecholate siderophore receptor
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_3245
Transporters [BR:
she02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr4_3245
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ABI40313
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Position
complement(3874770..3876965)
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AA seq
731 aa
AA seq
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MKFAKRRNGRVTLGAHVLGSLTIGMAVSAIPAMATEGQTQVVDKKVEHIEVNGEYLGYNS
RKVQSGKFTEDLLNTAKTVTVINQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRP
FIRGYDAQSSTFINGMRNVGSQSRETFNIEQIEVLKGPSSVYNGRGAVGGSINIVTKKAQ
SEDFINADVSVGTDSLKRASVDVNHVIADEAAVRINMMAHDADTPGRDEVTGNRWGVAPS
VTFGLTTPTKVTLEYYHFENHDIPDYGIPYDQATGEPADVDPDNFYGLLSRDFRDTMDDT
ASVLISHDFNNDMQFTSTSIYSRNSNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLA
TQLQLSGEAKLAGMTNRFAVGTELSNERTSNLSYTVDTGNGRNAGCDQAMLDNYNCTLLD
NPNPHDPWVGTITLGTDATVTETDTRSLYAFNTIELTEAWMVNAGIRWDDYSTSAENSTS
QFSNDTDFFNYQLSVLYKPAENGSIYAAWGTSSNPPGTSNGDGADRLGSTNADLEPEDTE
SYELGTKWDFFAGRLSLNGSVFQIEKNNARVATSGDRNSPQENVGEQKVKGFELGFSGDF
TEHWHGFGGYTYLDATLESNGYNQAQNGNRFPNTAKNSLSLFTTYDVTEDFTVGTGAYYM
GKVYGNTANTLSIPSYWRFDLTSSYKMSEFLTLRLNVQNLTDERYYDKAYTAHFANMAAG
RLVMLSADMHF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcaaaacgtcgtaatggtcgagtcacactcggtgctcatgttttaggttcg
ttaacgattgggatggcggtttcggccattcccgcaatggcaacggaagggcaaacgcaa
gtcgttgataagaaagtcgagcatattgaagtgaacggtgagtacttaggttacaacagc
cgtaaagtgcaatcgggtaaatttaccgaagacctgctcaataccgctaaaactgttacc
gttatcaatcaagatttaatcaaagatatgggcgcccagagttttaccgatgcgttgcgt
gcaactcctggtattaccttaggtacaggtgagggtggcaacccctacggtgatagacct
ttcatccgtggttacgatgcccaatcttcaacctttatcaatggtatgcgtaatgtgggt
tcacaaagccgcgaaacctttaacattgaacaaattgaagtcctgaaaggcccaagctct
gtatacaacggtcgtggcgccgttggtggtagcatcaacattgtgaccaaaaaagcgcaa
tccgaagactttattaatgccgacgtttccgttggaacggattcccttaaacgcgccagt
gtcgatgttaaccatgtgattgccgatgaggctgcggtccgtattaacatgatggcccac
gatgccgacaccccaggtcgcgatgaagttacgggtaatcgttggggcgtagcgccttcg
gtgacctttggtttaaccacgccaacaaaagtgacgctcgaatattatcactttgaaaat
catgacattcctgattatggtattccctacgatcaggctacgggcgagcctgcggatgtc
gaccctgacaacttctatggtctgttgtctcgagattttcgcgatactatggatgatacg
gcgtcagtgttgataagccatgattttaataacgacatgcagttcacttcgacctccatc
tatagccgtaacagcaattactatattgtgaccaacccggacgataccacgggcaacgtg
gctaatggttatgtttggcgaaacactaagtcgcgccattcggttactaagacactagcc
actcaattacaactctcgggtgaagcaaaactcgcggggatgactaaccgttttgccgtc
ggtactgaactcagtaacgaacgtactagtaatttaagttacaccgtcgatacgggtaat
ggccgcaacgcgggttgtgatcaggcgatgctggacaactacaactgtacgctgctggat
aatccgaatccgcacgatccttgggttggtactatcaccctcggcaccgatgcgacagtt
acagaaaccgatactcgctcgctttatgcctttaacaccattgagttaaccgaagcgtgg
atggtgaacgccgggatccgttgggatgattacagcaccagtgctgagaattcgacttct
caatttagcaatgatactgacttctttaactatcaattatcggtactttataagcccgct
gaaaacggcagtatttatgccgcgtggggcacttcttctaaccctcctggtacctcaaat
ggtgatggcgcggaccgtctcggcagcaccaacgccgatttagagcctgaagatactgaa
agctacgagttaggcactaagtgggacttctttgccggacgtttatctttgaatggttcg
gtattccaaatcgagaaaaacaacgctcgggtcgcgacctctggcgatcgtaattcgccg
caggaaaacgtgggtgagcaaaaggtgaaaggtttcgaacttggcttctccggtgacttc
actgagcattggcacggttttggtggttacacctatttggatgcgaccttggaaagcaat
ggttataaccaagcacaaaatggtaaccgcttccccaataccgctaaaaatagcttaagt
ttattcacgacttacgatgtgactgaggattttactgttggtacgggcgcgtactacatg
ggtaaagtttatggtaatacggctaacacgctgtcgattccatcctactggcgttttgat
ttgacttcatcttataaaatgagtgaattcttgaccttacgcctgaacgtgcaaaatcta
acggatgagcgttattacgataaagcgtataccgcgcactttgccaatatggccgctggt
cgcttagtgatgttaagtgcggatatgcacttctaa
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