Shewanella sp. MR-4: Shewmr4_3302
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Entry
Shewmr4_3302 CDS
T00388
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_3302
Transporters [BR:
she02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr4_3302
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABI40369
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Position
complement(3942058..3944019)
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AA seq
653 aa
AA seq
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MGTHPTKIALLIGSLCSFSVIAPAVAADDASVAKVDEHIVVIGRSDKTPLNIAANVNVID
AAAIEQSGATSLTEVLRGQSGIQLSDNNIGTSFAMRGFSASTAVNNTLILLDGRRLNNID
IAAPSLNAIPLNLIERVEILSGSAGVLYGDQAVGGVINIVTKSPENTGGSVQLSGGSFNT
YEGRGDVSGAINKDWHYFLTGSYNQGDNYRKHNANETGSILGRIQYKTATDSFFVETSYY
DDDRENPGSLTVDQFKDDPRQSFNSSEYVHEMTTAARSGYQHQLNQNWALAADLDYSDTL
VTSLNWGAGSQNTRSLLMFSPKALANYSTRQGELNLVTGLDISRGKAEFDSMARSNVQEM
QSAYLQATVPLSHTLSYVVGGRYARVTDDLVDGNVYPNGIDLDEDATAFEFGLNYRPSAE
HRFYLRGDENFRFAKVDEQAYTPKDVYGLKPQTGRSYEAGWDWTVASQSLRVSLYRLDLE
DEIVFDPSAEKPVGGSFQGANVNADASRRYGASADWDWQVTQALTLGLEYNYIDAEFTDG
VNDGKQLSWVAEHTGRGYVSMDFAEHFQVFAEAIYTGDRFIEGDNGNEGDKLSSYVLGNL
ALNYTRDAWLASLRIDNLFDKEYVSSGYYGGIWGDSYYSGRGRDIRFTLGYRF
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgggaacacatccaacaaaaatcgcgctgctgatcggcagcctttgcagtttttctgtt
atcgcccccgccgtggcggccgatgatgccagcgttgccaaagtcgatgagcatatcgtc
gtgattggccgttcagacaagacccccttaaatattgccgccaatgtgaatgtgattgat
gccgctgcgattgagcagagtggcgcaaccagcttgaccgaagtgttacgtggtcaaagt
ggtattcagctgtccgacaataacattggtactagcttcgcgatgcgcggctttagcgcc
agcaccgccgttaacaacaccttgattttgctcgatggtcgtcgcttaaataacatcgat
atcgccgcccctagcctgaatgccattccactcaatttaattgagcgtgtcgaaatttta
tcgggcagtgcgggcgtgctctatggtgaccaagcggtaggcggggtgatcaacattgtg
actaagtcacctgagaatacgggcggcagcgtgcaattatccggcggcagctttaatacc
tatgaaggtcgcggcgatgtgtcgggcgccatcaataaagattggcactatttcctgacc
ggtagctacaaccaaggcgataactatcgcaagcacaatgccaatgaaacgggttctatc
cttggccgtattcaatataaaaccgccacagattctttcttcgttgaaactagctattac
gatgatgatcgcgaaaatcctggctcgttgacggtggatcagttcaaggacgatccacgc
caatctttcaatagtagcgaatatgttcatgagatgacgactgctgcgcgcagcggttat
cagcatcagctaaaccaaaactgggcgttagcggcggatctggattacagcgatacctta
gtgacctcattaaactggggcgcgggtagccaaaatactcgctcgctgctgatgtttagc
cctaaagcactcgctaattacagcacccgtcaaggtgagctaaacctagtcactggtttg
gatatcagccgcggtaaggccgagtttgactctatggcgcgcagcaacgtgcaggaaatg
caaagtgcttacctgcaagccactgtgccattaagccacaccttaagctatgtggtgggt
ggccgttatgcgcgggtgaccgacgatctggtcgatggcaatgtgtatccaaacggcatc
gatttagatgaagatgcgaccgcattcgagttcggtttaaattaccgtccgagcgccgag
cacagattctatctgcgtggcgatgaaaacttccgctttgctaaggtcgatgagcaagcc
tacaccccgaaagatgtgtatggcttaaagccgcagacaggccgttcctatgaggcaggt
tgggattggactgtggcgagccaaagcctacgcgtcagcctatatcgcctcgatttagaa
gatgaaatcgtcttcgatccgagtgctgaaaaaccagttggtggcagtttccaaggcgcc
aacgtcaatgccgatgcttcacgccgctatggcgcgagtgccgattgggattggcaggtc
actcaagccctcaccttaggcttggaatataactatatcgatgccgaatttaccgacggg
gtgaatgatggcaagcaattgtcttgggtggctgaacatacgggacgcggttatgtcagc
atggattttgccgagcatttccaagtatttgccgaggcgatttacacgggcgatcgtttt
attgaaggcgataacggcaacgaaggcgataaattatctagctatgtcttaggtaatcta
gcccttaactatacccgtgatgcttggttagcgagcctgcgtatcgataacctgtttgat
aaagagtatgttagctcgggttactacggtggcatttggggtgatagctattactcaggc
cgaggccgtgatattcgctttaccttaggctatcgtttctaa
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