Shewanella sp. MR-4: Shewmr4_3321
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Entry
Shewmr4_3321 CDS
T00388
Name
(GenBank) uncharacterized domain
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
she03009
]
Shewmr4_3321
Ribosome biogenesis [BR:
she03009
]
Prokaryotic type
ribosomal protein modification factors
Shewmr4_3321
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
ABI40387
LinkDB
All DBs
Position
complement(3964414..3966642)
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AA seq
742 aa
AA seq
DB search
MRLPRLSILSGKILMEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLAS
SALCAAYFVKVYCKSRDIPTDNIRLSQNNIVDPEDRYNQIFQINVELPDDISDKDREGIL
RSIDRCTVKKVVQTGPEFRIETVENLDADANAMLMGHPGDDSSTYILGKDLPLEQTIANM
TGILAELGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERL
NNNFFYNDQFFGVEIANSEFVHYPNEKWFALEEDDALPAGLLDDYCLEIYNPDEELCGSH
LIDTNSGNRDRGICAIPYKRKSDGETVYFPSNLIENLFLSNGMSAGNNIKEAEVQCLSEI
FERAVKRQIIEQEIVLPDVPMSVLEKYPSILAGIKGLEEQGFPVVVKDASLGGQFPVMCV
TLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFV
EHFIDSTGVISWRFFSSKHDYEFCEWDFSGTNQEEADRLFGILEELGKEVYVAEFTELGA
SACRILVPDYSEVYPVEDLIWDNTNKALDYREDILNLHSLSTKQLVNLVNRLEESQLDNY
TDIRTLIGIVFDENTVWGKLTIIELKILIYLALGAHEEALELVGEFLQFNDNTVKRNLFF
QAMSAVLEVTLDEDLELEDFSHNFTRMFGAEVMEQVVGSVTGKVRFSGLTKTSMQLEGIE
PHLRLIESYKKLHAARKAKAAN
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaccgcgtttgagcatattgagtggaaaaattctaatggaaatcaaagttaat
tttctcgacaacctgagactcgaagccaagttcgacgattttacggtaacggccgatcag
cccatccgttataagggcgacggctcggcgccgagtcccttcgattactttttagcttct
tcggcattgtgcgccgcctactttgtgaaggtatattgtaaatcccgcgatattccgacg
gacaatatccgtctgtcgcaaaacaatattgtcgacccagaagatcgctacaaccagatt
ttccagatcaatgtcgaattacccgacgatatttcggataaagatcgcgaaggtattttg
cgctccatcgaccgctgcacagtaaagaaagtcgtgcagactggcccagaatttagaatc
gaaaccgttgaaaacctcgatgccgatgccaatgccatgttgatgggtcacccaggcgac
gacagtagcacctatatcttgggtaaagacttaccgctggagcagaccattgccaatatg
accggcattttggctgagcttgggatgaagattgagatctcctcatggcgtaacattgtg
cccaatgtgtggtcactgcatatccgtgacgccgcatcacccatgtgttttaccaatggt
aaaggcgcaaccaaagagagcgcgttgtgctcggccctcggtgaatttattgagcgttta
aacaataactttttctataacgatcaattctttggcgttgaaatcgccaatagcgagttt
gtgcattatcccaacgaaaagtggtttgccctagaggaagacgacgccctgccagcgggt
ctgttagacgactactgcctagagatttataaccccgatgaggagctgtgtggctcacat
cttatcgacactaactcgggcaatcgtgaccgaggcatttgtgcgattccgtacaagcgt
aaatccgatggcgagactgtgtacttcccatcgaacctgattgaaaacctgttcttaagc
aatggcatgagcgcgggtaacaacatcaaagaagccgaagtacagtgtctctctgaaatc
ttcgagcgcgcggtgaaacgccaaattatcgagcaagaaatcgtcctgccagacgtgcct
atgtcggtgttagaaaaatacccaagcattcttgcgggcattaagggcttagaagaacaa
ggcttcccagtggtggtgaaagatgcctccttaggcggtcagttccctgtgatgtgcgtg
acgctgatgaatccgaaaaccggcggggtattcgcctccttcggtgcccacccaagcttt
gaagtggcattggagcgcagtctgaccgaattgctccaaggtcgcagcttcgaaggctta
aacgatgtgccaaaaccgacctttaacagcatggcggtgagcgagcctgaaaactttgtt
gagcactttatcgactcaactggggtgatctcatggcgcttctttagcagcaagcatgac
tatgagttctgcgaatgggatttctctggcactaaccaagaggaagcggaccgtttattc
ggcattttagaagagctaggtaaagaggtgtatgtcgccgaatttaccgaattaggcgca
tcggcttgccgtattttagtgcctgattactcagaagtttatccagtagaagacctgatt
tgggacaacaccaacaaggcgctggattaccgtgaagatattctgaatctgcattcttta
agcactaagcaattggttaacctagtcaatcgtttagaagaaagtcagctcgataactac
accgatattcgtaccctgattggtatcgtcttcgatgaaaataccgtttggggtaagttg
acgattatcgaacttaagatcttgatttatctggcactcggcgcgcatgaagaggcgttg
gaattagtcggtgagttcctgcaatttaacgataataccgtgaagcgcaatctgttcttc
caagcaatgagcgcggtactggaagtgacgctggatgaagaccttgagctcgaagacttt
agccataactttacccgcatgtttggcgcggaagtgatggaacaagtggtcggtagtgtt
actggtaaagttcgtttcagcggtttaactaagaccagcatgcagctcgaagggattgag
ccacatttacgcttaatcgagagctataagaaactgcacgccgcccgcaaggccaaagcg
gcgaactaa
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