Shewanella sp. MR-4: Shewmr4_3451
Help
Entry
Shewmr4_3451 CDS
T00388
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
she03009
]
Shewmr4_3451
Enzymes [BR:
she01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Shewmr4_3451
Ribosome biogenesis [BR:
she03009
]
Prokaryotic type
ribosomal protein modification factors
Shewmr4_3451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
Methyltransf_2
UPF0180
YajR_YAM
CLP1_P
TRAM
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ABI40517
UniProt:
Q0HEK0
LinkDB
All DBs
Position
4125965..4127395
Genome browser
AA seq
476 aa
AA seq
DB search
MTVETFNPKQTTTLETPAKTLEAASADSTATGNRIGFVSLGCPKNLVDSERILTQLRIDG
YEVTNSYDNADLVIVNTCGFIDAAVEESLDAVREALEENGKVIVTGCLGAKENQIREVHP
DVLEITGPHSYEAVLKHVHKYVPKPEHNPFTSLIPQTGVKLTPKHYAYLKISEGCDNRCT
FCIIPALRGDLDSRPAGSVLDEAKRLVESGVQEILVVSQDTSAYGKDKGGRTDFWNGMPV
KQDITSLARQLGKMGAWVRLHYIYPYPWVDDLIPLMAEGLILPYLDIPMQHASPRILKMM
KRPGRVDRQLEAIQRWREICPDLVIRSTFIVGFPGETEEDFEMLLDFLREARLDRVGCFK
YSEVEGAVANTIAELISEDVKEDRYHRFMEVQAEISAERLARFVGRTMDILIDDVDEEGA
IGRSFADAPEIDGMVFINGETELEPGMLVRAVITHSDEHDLWAELVDADAEDDIEA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgaaacttttaatcctaagcaaacaaccacgcttgagaccccagccaagaca
ttagaagcagcgagcgctgattctactgcaacagggaatcgcatcggtttcgtgtctttg
ggttgcccaaaaaacctagtggactcagagcgcattctgacccaattacgcatcgacggc
tatgaagtcaccaacagctacgacaatgccgatctggttatcgtcaacacctgtggcttt
atcgatgcggcggttgaagaatccttagatgcggtgcgcgaagccctagaagaaaacggc
aaagtgatcgtgaccggctgtttaggcgccaaggaaaaccaaatccgtgaagtgcaccca
gacgtgctcgaaatcacggggccacacagctacgaagccgtgttaaagcatgtacacaag
tacgtgccaaaaccagagcacaacccatttacctcgttaatcccacaaactggggttaag
ttaacgcctaagcattatgcttatttaaagatttcagaaggttgtgataaccgttgtacc
ttctgcatcatccctgcactgcgtggcgatttagacagccgcccagcgggtagcgtttta
gatgaagcgaaacgcttagttgaatcaggcgtacaagaaattttagtcgttagccaagac
acctctgcctacggtaaagacaagggcggccgcaccgatttctggaacggtatgccagtg
aagcaagacatcactagccttgcccgccaattaggcaagatgggcgcttgggtacgttta
cactacatctacccatacccatgggtagacgatctaatccccttgatggccgaaggttta
atcctgccatacctagatattccaatgcagcacgccagcccacgcatcctgaagatgatg
aagcgtccgggccgtgttgatcgtcagttagaagccattcaacgctggcgcgaaatctgc
ccagacttggtgatccgctcaacctttatcgtgggcttccctggcgaaactgaagaagac
ttcgaaatgctgctcgacttcctgcgtgaagcgcgcctcgaccgcgtaggttgcttcaag
tactcagaagtagaaggtgctgtagccaacaccatcgctgaacttatcagcgaagacgtg
aaggaagacagataccacagatttatggaagtccaagccgagatcagcgccgagcgttta
gcccgtttcgttggccgcactatggatattctgatcgatgacgtagacgaagaaggcgcc
attggccgcagcttcgccgatgctccagaaatcgacggcatggtctttatcaacggtgaa
accgaactcgaacccggcatgttagttcgtgctgtgatcactcactcggacgagcacgat
ctgtgggccgagttagtcgacgccgatgcagaagatgatatcgaggcttaa
DBGET
integrated database retrieval system
