Shewanella sp. MR-4: Shewmr4_3454
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Entry
Shewmr4_3454 CDS
T00388
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_3454
Transporters [BR:
she02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr4_3454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
ABI40520
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Position
4129221..4131362
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AA seq
713 aa
AA seq
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MEDNKMAANASTIPHGFKCSAIASALTLALGASVASQAMADETNQTQIERIQVHGEQSIG
RNALGSADALLKDQGVDFSEAGGVSALPVLNGMMGDRIKVLVDGADITASCANQMNPPLS
YVSANQISSVEVVAGVSPVSAGGDNIAGVIKVNSLNPKFSDSEDLSFESGEISSGYRSTS
DAFLLGAKAGIASKNLSFSYQGAYEDANSYHDGHGDKVLDTLYRAQNHALTAAWRDDTQQ
LAIKLTHQAIPFQGFPNQYMDMTDNKSYGALVRYLRDLDNDGEFSAQLNWHSVKHEMGFF
TPEKTGKMPMNTEGSDYSYQLHWRLPIGDDSTLLVGQEFYNYQLDDTWPAVPGTMMAPND
YININDGERRRAAVYGEWQQNLTPLWWLSAGVRYEYATTDTGEVQAYSNMPMMGMPNMDA
EAAKAFNAMDRSRDDNLIDATLLARYQLSAKQQLEFGLARKNRAPNLYERYSWGRGVMAT
TMIGWYGDGNGYVGNPDLKPETAHTLSAAYKFAGDEWQFSTTAWYSAVTDYIDAEVIGSF
NRTGLASGKRNILKFTNEDAHLYGAKLSANYLLADTDSGKWQMQGKLNITRGERDEGNEP
LYQIKPLQTELALSHQLGDWENRLSWQWVATKDKVDDRRLENETDSYSLLNLSSSIKWQE
LSLTFAINNLFDTYYELPLGGVNLAEFKADSSGGFSQFAGSGRSFELGASYRF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaataagatggctgcaaacgcttcaactatcccccacggctttaaatgctct
gcaatcgccagcgcgctgaccttagcattaggcgcttcggttgcctcacaggccatggcc
gacgagacaaatcagactcaaattgaacgtattcaagtccatggcgaacagagtattggc
cgtaatgccttaggctcggctgatgctttgctaaaagaccaaggcgtcgatttctccgaa
gcgggcggcgtttccgccttgcccgtactcaatggcatgatgggcgatcgcattaaagta
ttagtcgatggcgcggatatcaccgcctcctgtgccaaccaaatgaacccaccactctcc
tacgtttccgctaatcaaatcagctcggtagaagtggtcgcgggcgtgtcccctgtcagt
gcgggcggcgacaatatcgccggggtgattaaggttaatagcctgaatcctaaatttagc
gacagcgaagacctcagcttcgaaagcggcgagatttcatcgggataccgcagcaccagc
gatgccttcttactcggtgctaaggctggaatcgccagtaagaacttaagtttcagctat
caaggcgcctatgaagatgccaatagctaccacgatggtcacggcgataaagtgctcgat
accctctatcgcgcccaaaaccatgccttaacagcggcatggcgcgatgacacacaacaa
ctggcgattaagctaacgcatcaggcgatcccgttccaaggtttcccgaaccaatacatg
gatatgacggataacaagagttatggcgccctagtccgttatctgcgggatttagacaac
gacggcgaatttagcgcccagttaaactggcacagtgtgaagcatgaaatgggcttcttc
actccggaaaaaaccggcaagatgccgatgaacactgagggcagcgattacagctaccaa
ctgcattggcgcttacctatcggcgatgacagcacgttactcgtcggtcaggaattttat
aactatcaactcgatgatacttggccagccgtgcccggcactatgatggcacccaatgac
tatatcaatatcaacgatggtgaacgccgccgcgccgcagtttatggcgagtggcagcaa
aacctcacgccactctggtggttatctgccggggtgcgttatgaatatgccaccacagat
acgggcgaagtgcaggcctacagcaatatgcctatgatgggcatgccaaatatggatgcc
gaagcggcaaaagcctttaatgctatggatagaagccgagacgataaccttatcgatgct
acgctgttggcgcgttatcagctatcggccaagcaacaattggaatttggcttagcccgt
aaaaaccgcgcgccaaacctgtatgagcgttacagctggggccgtggcgtgatggcaacg
acaatgatcggctggtatggcgacggtaacggttacgtgggcaatcccgatcttaagcct
gaaaccgcccacaccctgagcgcggcctacaagtttgcgggcgatgaatggcaattctcg
accacggcttggtatagcgcagtcacagactatattgatgccgaggtgattggcagcttt
aaccgtactggccttgccagcggtaaacgcaatatccttaaattcaccaacgaagatgcc
catctatatggcgctaagttgagtgcgaactacctattagccgataccgacagcggtaaa
tggcagatgcagggcaagctgaatatcacccgtggcgagcgcgatgagggtaacgagccg
ctttatcaaatcaaaccgctacaaaccgagttagcccttagccatcaactgggtgattgg
gaaaaccgcctgtcatggcaatgggtagcgactaaggataaggtcgatgatcgccgctta
gaaaatgagaccgacagctattcgctgctaaatctaagcagcagtatcaaatggcaagag
ctgagtttaacctttgcgatcaacaacctgtttgatacttactacgaactgccactgggt
ggtgtcaaccttgccgaatttaaggccgatagcagtggtggctttagccaattcgcaggc
tcgggtcgctcatttgaattaggcgctagctatcgcttctaa
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