Shewanella sp. MR-4: Shewmr4_3615
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Entry
Shewmr4_3615 CDS
T00388
Name
(GenBank) (p)ppGpp synthetase I, SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
she
Shewanella sp. MR-4
Pathway
she00230
Purine metabolism
she01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Shewmr4_3615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
she03009
]
Shewmr4_3615
Enzymes [BR:
she01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
Shewmr4_3615
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
Shewmr4_3615
Ribosome biogenesis [BR:
she03009
]
Prokaryotic type
Other maturation factors
Shewmr4_3615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
ACT
ACT_AHAS_ss
UreF
Motif
Other DBs
NCBI-ProteinID:
ABI40679
LinkDB
All DBs
Position
4321454..4323556
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AA seq
700 aa
AA seq
DB search
MYLFEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMR
LDHETLMAALLHDTIEDTYVTKEDLAEQFGEAVAELVEGVSKLDKLKFRDKKEAQAENFR
KMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHNIKT
ELEDLGFQAYYPMRYRVLKEVVKAARGNRKELIQGIEAAVLTRLNDAGIKGKVKGREKNL
YSIYNKMQSKELQFQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKA
NGYQSLHTSLFGPHGVPVEIQIRTEDMDQMADKGVAAHWAYKGGPDGQGTTTQVRARKWM
QSLLELQQSASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGN
TCVGARVNRQAYPLSQPLISGQTVEIITAKGARPNAAWLNFVVTGKARAKIRQVLKSLKA
DDAIALGRRLLNHALGKTKLDSIPAEQIDKVVRDTKHANLNSLLADIGLGNAMSIVIAQR
LIGDNLENQESRDSHLMPIRGAEGMLVTFANCCRPIPGDAVIAHVSQGKGLVVHMENCAN
IRGYQGEPDKYIPVQWDNVEGVEYQANLRVEIVNHQGALAKITSIIAAEGSNIHNLSTEE
RDGRVYLINLRISVKDRIHLANVMRRIRVLPEVLRTSRNR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
ttgtatctgtttgaaggtctaaaggagtctgcttccggttacttagaacccgaacaggta
gaattgctcaagcaggcgtaccaagttgcgcgtgatgcccatgaaggtcaaatgcgcacc
agcggcgaaccttatattacccatccggttgcggttgcccgcatcctcgccgagatgcgt
ctcgatcacgagacgctgatggctgccttgctgcacgacaccatcgaagatacctatgtc
accaaagaggacttggccgaacaatttggcgaagccgtggcagagttggttgaaggggtg
tctaagctcgacaagctgaaatttcgcgataaaaaagaagcccaagcggaaaactttcgc
aaaatgatgatggcgatgacgcaggatatccgcgttattctcatcaagcttgccgaccgt
acccacaacatgcgtaccttaggtgcactgcgccccgataaacgccgccgcattgcccgc
gaaaccttagagatttacgcgccgattgccaaccgactcggtatccacaatatcaagacc
gagttagaggatttaggcttccaagcctattatccgatgcgctatcgggtgttaaaggaa
gtggtcaaagctgcccgtggtaaccgcaaagaactcatccaaggcattgaagctgcggtg
ttaactcgcctaaacgatgcgggcattaaaggcaaagttaaaggtcgcgagaaaaacctc
tactccatctacaacaagatgcagagcaaggaactccagttccaagaggtgatggatatc
tacgcctttcgcgtcatcgtcgactccatcgatacttgctaccgtgtgctcggtgccatg
cacggcctgtataaaccgcgtccgggtcgctttaaagattatatcgctatccccaaagcc
aacggttatcagtcgttacatacctcattattcggcccacacggcgtgcccgtcgagatc
caaattcgtaccgaagatatggatcaaatggccgacaaaggggttgcggcccactgggct
tacaaaggcggccccgatggtcaaggcactaccacgcaagtgcgtgcccgcaagtggatg
caaagcttgctggaactgcaacagagcgccagcacctccttcgaattcgtggaaaacgtt
aaaaccgaactcttccccgaagagatttacgtattcacccccgaaggtcgcattttagaa
ttaccggttaacgccaccgccgtcgactttgcctatgaagtccacaccgatgtgggcaat
acctgtgtcggcgcccgtgttaaccgccaagcttacccgttaagccagccattaatctcc
ggccaaaccgttgagatcattaccgctaaaggcgcgcgtccgaatgccgcttggcttaac
tttgtggtgacaggtaaagcccgcgccaaaatccgccaagtgcttaagagcctaaaagca
gacgatgctatcgcccttggccgccgtttgcttaaccatgcgctgggtaaaaccaaactc
gatagcattcctgccgagcagattgataaagtcgtgcgcgataccaagcacgccaattta
aattccttactcgccgacatcggcctgggcaatgccatgagcatagtcatcgcccaacgt
ttgattggcgataatttagagaatcaagagagccgcgattctcacctgatgccaatccgt
ggcgccgaaggtatgttagtaaccttcgctaactgttgccgccccatccctggtgatgcg
gtgattgcccacgtgagccaaggtaaaggcttagtcgtccacatggaaaactgcgctaac
attcgcggttaccaaggcgagccagataaatacattcccgtgcagtgggacaatgtcgaa
ggcgttgaatatcaagccaatctgcgggtggaaattgttaaccaccagggcgcgctggca
aagattacctcgattatcgccgccgaaggttcgaacattcacaaccttagcaccgaagag
cgcgatggccgcgtttacttgattaacctgcggatttcggtgaaggacaggatccattta
gctaacgtgatgcgccgtatccgggtactgcccgaggtattgcgtacatcacgtaatcgt
tga
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