Shewanella sp. MR-4: Shewmr4_3667
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Entry
Shewmr4_3667 CDS
T00388
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
she
Shewanella sp. MR-4
Pathway
she00330
Arginine and proline metabolism
she00480
Glutathione metabolism
she01100
Metabolic pathways
she01110
Biosynthesis of secondary metabolites
she04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Shewmr4_3667
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Shewmr4_3667
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Shewmr4_3667
Enzymes [BR:
she01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Shewmr4_3667
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
ABI40730
LinkDB
All DBs
Position
4376775..4378937
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AA seq
720 aa
AA seq
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MKSLKVAASLSVRSCFEIDREVVNVLTTDFCDVGAAVVSVDDVRNGIVEKIKNTGLKLPI
FVSVCCEETFPDDICSSITGVFELCGSNTDFYGKQVETAVQKYEQALLPPFFGTLKKYVE
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETIFRSDMCNADVKLGDLLIHEGAPLDAQ
KYAAKVFNADKTYFVLNGTSSSNKVATNALLAKGDLVLFDRNNHKSNHHGALIQAGATPI
YLETARNPFGFIGGIDAHCFQESYLREQIRAVAPERADEQRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMNDCSPLLLELTPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDSHIKGQARYCNHKRFNNAFMMHASTSPFYPLFAALDVNAKMHEGASGRYL
WREAVKAGIEARKLLLKKCKYIKPFIPSMIEGRPWQDYPTEQMADDLRFFEFEPGQKWHS
FDGYEKGQYFVDPCKFLLTTPGIDAETGKYTEFGIPATILANFLRENNIIPEKCDLNSIL
FLMTPAEDMAKMQHLVSQISRFEKLVDEDAPLSEVLPNVYNANKARYKDYTIRQLCQEMH
NLYVSHDVKQLQKEMFRQAHFPTKVMDPQEANLEFIRGKVELVPLSQIEGRIAAEGALPY
PPGVLCVVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYLENTPDGKIQALGYVLNK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattaaaagttgccgccagcttatctgttagatcatgttttgaaatagacaga
gaagtcgtcaatgtattaaccacagatttttgcgatgtgggtgcggctgtagtctctgtt
gatgatgttagaaatggtattgttgaaaaaattaaaaataccggattgaaactgcctatt
ttcgtatcagtttgttgtgaagaaaccttcccagatgatatttgctcttctattaccggg
gtatttgaactctgcggtagcaataccgatttctatggcaaacaggtcgaaaccgccgtc
caaaaatatgagcaagccctattaccgccgttctttggcacactgaaaaaatacgtggaa
atgggcaactccaccttcgcctgcccaggccatcagggtgggcaattcttccgtaaacat
cctgtgggtcgccaatttttcgatttctttggcgaaaccattttccgctccgatatgtgt
aatgccgacgttaaactcggcgatctgttaatccatgaaggcgcgccactggatgcacaa
aaatacgcggccaaagtctttaacgccgataaaacctactttgtgctcaacggaacttct
tcttcaaataaagtggcgaccaacgcactgctggcgaagggagacttggtattattcgac
cgtaacaaccataaatccaaccaccatggcgcgttaattcaagccggtgcgacaccgatt
tatttagaaaccgcccgtaaccccttcggctttattggtggcatcgacgcccactgcttc
caagagtcttatttaagggagcagatccgcgccgttgcacctgagcgtgccgatgaacaa
cgtccattccgtttagccattatccagctgggcacctacgatggcactatctacaacgct
cgccaagtagttgatcgtattggacatctatgtgattacatcctgtttgactcggcttgg
gttggctatgagcaatttattcctatgatgaatgactgctcgcctctgctgctcgaactg
acgcctgaagatcccggtattatcgtgactcagtcagtacacaaacagcaggcaggcttc
tcacaaacctcgcaaattcacaaaaaagactcacatatcaaaggccaagccagatactgc
aaccataaacgcttcaacaacgcctttatgatgcacgcctctaccagccccttctatccg
ctgtttgccgcattggatgtgaacgctaaaatgcacgaaggcgccagcggccgttatctg
tggcgtgaggcggttaaagccggtattgaagctcgcaagttactgctcaaaaaatgtaaa
tatatcaagccatttatcccaagcatgatcgagggacgcccatggcaggattatccaacc
gaacaaatggccgatgatttacgtttcttcgagtttgaacccggacaaaaatggcactcc
ttcgacggttacgaaaaaggccaatatttcgtagacccttgtaagttcctattaaccacg
cctggtatcgatgccgaaacgggtaaatatactgagtttggtattccagcaactattctg
gctaacttcttacgtgaaaataatattattcccgagaagtgcgacttaaattcgatttta
ttcctgatgacacctgcggaagatatggcgaagatgcaacacttagtgtcgcaaatatct
cgcttcgaaaaattagtcgacgaagatgcgccattatctgaagtattacctaacgtctat
aacgccaataaagcccgttataaagactataccattcgtcaactctgccaagaaatgcac
aacctttatgtcagccatgacgtaaaacaactgcaaaaagaaatgttccgtcaggcgcat
ttcccaacaaaagtgatggacccacaggaagccaacctcgagtttatccgtggcaaagtg
gagttagtaccactgtcacaaattgagggacgcattgccgcagaaggtgcattgccttat
ccacctggagtgttatgtgtggtcccaggtgaaatatggggtggcgctgtacaacgttat
ttcttagcccttgaagaaggcatcaacttattacccggattctcccctgaattacaaggt
gtttacctcgaaaacaccccagacggaaaaatccaagccctaggttatgtattaaataaa
taa
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