Shewanella sp. MR-4: Shewmr4_3683
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Entry
Shewmr4_3683 CDS
T00388
Name
(GenBank) Protein of unknown function UPF0011
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
she03009
]
Shewmr4_3683
Enzymes [BR:
she01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Shewmr4_3683
Ribosome biogenesis [BR:
she03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Shewmr4_3683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
ABI40746
LinkDB
All DBs
Position
complement(4400550..4401395)
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AA seq
281 aa
AA seq
DB search
MDQSVALYIVPTPIGNLGDMSPRAIEVLTQVALIACEDTRHSGKLLSHFGISTKTIALHD
HNERARAQWIVDQLAAGQSIALISDAGTPLISDPGYHLVSHVRQSGFRVVPLPGPCAAIT
ALSASGLPSDRFAFEGFLPSKEKARADKLLELKEDPRTLIFYESPHRIEHSLTTMAQVLG
DERQVVMAREVTKTFETFLSGPVAEVLATVSSDPNQQKGEIVLMVHGHRAADDDEAIPTV
AINTLKLLCEELPLKKAAAIAAQIHGLKKNALYKFGLESDL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaagcgtcgcactctatattgttcccactcccattggtaacttgggggacatg
agcccacgtgctatcgaagtgctcactcaggtcgcattgattgcctgtgaagatacgcgc
cacagcggcaagttattgagtcattttggtatttctaccaaaactatcgcattgcatgac
cataacgagcgtgcccgcgcccaatggattgtagatcaactggccgcagggcaatcgata
gcgctgatttccgatgcgggcacgccgctgatttcggaccctggctatcacttagtctcc
catgtgcgccagtcgggttttagagtggttccattgccaggcccttgcgccgcgattacc
gcattaagcgcgtcgggtttaccgtcggatcgtttcgccttcgaaggtttcttaccttct
aaagagaaggcgcgcgccgataagttactcgagctcaaggaagatccgcgtacgctgatt
ttttatgaatcaccgcaccgcatcgagcatagcctgacgactatggcccaagtcttaggt
gacgaacgccaagtggtcatggcgcgtgaagtgactaaaaccttcgaaaccttcctctct
ggccctgtggccgaggtgttggccacggtcagctcagatcctaaccagcaaaaaggtgag
atagtgctgatggtgcatggacaccgcgctgcggacgatgatgaagctattcccacagtt
gccatcaacactttgaaattactctgtgaagaattgcccctcaaaaaggccgccgccatt
gccgcgcaaattcacggtcttaaaaagaatgctctgtataagttcggcttagagtcggat
ttataa
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