Shewanella sp. MR-4: Shewmr4_3809
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Entry
Shewmr4_3809 CDS
T00388
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
she
Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:
she00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Shewmr4_3809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ABI40872
LinkDB
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Position
complement(4547428..4549767)
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AA seq
779 aa
AA seq
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MQTIAQIIAQELNVQEHQVTATIDLLDNGATVPFVARYRKEATGGLDDTQLRTLHTRLGY
LRELNDRRQVILSSIQTQGKLTPELQREIEGADSKTRLEDLYLPFKPKRRTKGQIAIEAG
LEPLVEAVLADRNADIEALAAGYLNLEAGFADTKAVLEGARYILMERYAEDAELLRKVRE
HLSQNSVLESRVIAGKEKEGAKFRDYFEHNEPLAKVPSHRALAMLRGRNEGFLSLSMNAD
PAAEAGQGSYCEVIISEHLGLKLGESTVDQWLKTVVTATWRIKIALQMETEFISQMRERA
EAEAIKVFARNLGDLLMAAPAGAKATMGLDPGLRTGVKVAVVDNTGKLVAHTTIFPHAPQ
NLWDKSIRTLANLAQMHKVELIAIGNGTASRETDKLAGELIASLKDSQPQLTKVMVSEAG
ASVYSASELAALEFPELDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQSQL
SSSLEAVVEDCVNGVGVDLNMASVPLLSQVAGLNKTLAKNLVDYRDANGAFKNRKELLKV
PRLGPKAFEQAAGFLRIRDGDNPLDMSAVHPEAYALVETIAKTKQVELASLIGNSELLRN
IKPQEFTTPEFGLPTVTDILSELDKPGRDPRGEFKTAKFKDGVEELKDLKPEMILEGVVT
NVTNFGAFVDIGVHQDGLVHISSLTDKFITDPHTVVKAGDVVKVKVMEVDVERRRIGLSM
RLDEAIDQSKAQTRSPSQGKPQAHKGNAQHKSSRPAPKAAPVNAAMGNAFADAFAKLKK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcagactattgcccaaattattgctcaggaactgaatgttcaggagcatcaagtcact
gccaccatagatttgctcgacaatggtgctaccgttcccttcgttgcccgttaccgtaaa
gaagcgactgggggcttagatgacacccagttacgtacgctgcacactcgtttaggttat
ttacgcgagctgaatgacagacgtcaggtcattttatccagcattcaaacccagggtaag
ttaacgcctgaattgcaaagggaaattgaaggcgcggacagcaaaacccgtctcgaagat
ctgtaccttcccttcaagcctaaacgccgtactaagggccaaattgcgattgaagcggga
ttagagccgcttgttgaagctgtgcttgccgatcgcaatgccgatatcgaggcattggct
gcgggttatctgaatctcgaagcgggctttgccgataccaaagccgtgctggaaggcgct
cgttatattctcatggagcgttacgccgaagatgcggaattactgcgtaaagtccgtgag
cacttaagccaaaacagtgtgttagagagccgcgttatcgccggcaaagagaaggaaggc
gctaagtttcgcgactatttcgagcacaacgaacctctggcgaaagtgccgtcacatcgc
gccttggcgatgttgcgtggccgcaatgagggcttcctatctctatccatgaatgccgat
cctgctgcagaagcgggtcagggcagttactgtgaagtgatcattagcgagcacttaggc
ttaaaacttggcgagagcacagtcgatcaatggcttaagaccgttgtgaccgccacatgg
cggattaaaattgccctgcagatggaaaccgagtttatctcgcaaatgcgtgagcgcgcc
gaagcagaagccattaaagtgtttgcccgcaacttaggcgacttacttatggccgcacca
gcgggcgccaaggcgactatgggtctagacccggggctacgcacgggcgttaaagtggcc
gtggtggataacacgggtaagctggtcgcacatacgactatcttcccccatgcgccgcag
aatttgtgggacaagtcgattcgtaccttagccaacttagcgcaaatgcataaggtggaa
ttaatcgcgattggtaacggcactgcatcacgcgaaactgacaagttagcgggtgagttg
attgccagccttaaggatagccaaccgcaactaaccaaggtgatggtgagtgaggctggt
gcttccgtgtattccgcctcagaactcgctgcgctggagttccctgagctggacgtgtct
attcgtggcgccgtttcgattgcacgccgtttacaggatcccttagcggaactggtgaag
attgagcctaaatccatcggtgtgggtcaataccagcacgatgtaagccaaagccagttg
tctagctcgctcgaagccgtggtcgaagactgcgtaaacggtgtgggcgtggatttaaac
atggcgtcagtgcctttgctgtcgcaggtggcggggttaaacaaaaccttagcgaaaaac
ctggttgactaccgcgatgccaatggtgccttcaaaaaccgtaaagagctgctgaaagtg
ccacgcttaggccctaaagcctttgaacaagctgcaggctttttgcggatccgtgatggc
gacaatcccttggatatgtcggcggttcaccccgaagcctatgcgctagtcgaaaccatt
gctaagactaagcaagtggagttggcgagccttatcggtaattctgagctgctacgcaat
atcaagccgcaggagtttacgacccctgagtttggtttaccgacagtgaccgacatcctc
agcgagctggataaaccgggtcgtgacccccgtggtgagtttaaaaccgccaaatttaag
gatggggtggaggagcttaaggatctgaaaccagagatgatcctcgaaggcgttgtcacc
aacgtgactaactttggtgcctttgtggatatcggtgtgcatcaagatggtttagtgcat
atctcgtcattaaccgacaaatttattaccgatccccatacagtggtgaaagcgggtgat
gtagtgaaagtgaaggtgatggaggtcgatgtcgagcgtcgtcgtatcggtttgagtatg
cgtctggatgaggctatcgatcagagcaaggctcaaacacgcagcccatctcaaggtaag
ccacaggctcataagggcaatgcccagcataagtcttcgcgtcctgcgccaaaagcggca
cctgtcaatgcggccatgggcaatgcctttgccgacgctttcgcaaagctgaaaaagtaa
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