Shewanella sp. MR-4: Shewmr4_3905 Help Entry Shewmr4_3905      CDS       T00388                                  Name (GenBank) DNA polymerase I   KO K02335   DNA polymerase I [EC:2.7.7.7] Organism she  Shewanella sp. MR-4 Pathway she03030   DNA replication she03410   Base excision repair she03420   Nucleotide excision repair she03440   Homologous recombination Brite KEGG Orthology (KO) [BR:she00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Shewmr4_3905    03410 Base excision repair     Shewmr4_3905    03420 Nucleotide excision repair     Shewmr4_3905    03440 Homologous recombination     Shewmr4_3905  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:she03032]     Shewmr4_3905    03400 DNA repair and recombination proteins [BR:she03400]     Shewmr4_3905 Enzymes [BR:she01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      Shewmr4_3905 DNA replication proteins [BR:she03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Shewmr4_3905 DNA repair and recombination proteins [BR:she03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA polymerase I      Shewmr4_3905    NER (nucleotide excision repair)     GGR (global genome repair) factors      Shewmr4_3905 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 Motif Other DBs NCBI-ProteinID:  ABI40968 LinkDB All DBs Position 4655692..4658460 Genome browser AA seq 922 aa AA seqDB search MPTIANNPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYQPSHIAV VFDAKGKTFRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISIPGVEADDVIGT IARQASRENRAVLISTGDKDMAQLVDENITLINTMTDTIMGPEEVAAKYGVGPDRIIDFL ALMGDKADNIPGLPGVGEKTALAMLTGAGSVANLLAEPEKVTELGFRGAKTMAAKIIDNA DMLKLSYELATIKTDVELEQDWHELEAKPADRDELIKCYGEMEFKRWLAEVLDNKAPTTA AAKVETTETQEETAPSVTIETQYDTILTEAQLDEWIAKLKQAPLMAVDTETTSLDYMVAE LVGLSFAVEAGKAAYLPLAHDYVGAPQQLDKQTALEKLRPILEDAKLKKVGQNLKYDISV LANAGIQLQGVVFDTMLESYVFNSVASRHDMDGLALKYLGHKNIAFEDIAGKGAKQLTFN QIQLETAAPYAAEDADITLRLHQHLWPRLEKETELASVFTDIELPLIQILSDIERQGVFI DSMLLGQQSDELARKIDELETKAYDIAGEKFNLSSPKQLQVLFFEKLGYPVIKKTPKGAP STAEEVLVELALDFPLPKVILEHRSLTKLKSTYTDKLPLMVNAKTGRVHTSYHQANAATG RLSSSEPNLQNIPIRTEEGRRIRQAFIAPQGRKILAADYSQIELRIMAHLSQDAGLLKAF AEGKDIHRATAAEVFGTDFDSVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRNEAQTY IDTYFARYPGVLRYMEETRASAAELGYVSTLFGRRLYLPEIRDRNAMRRQAAERAAINAP MQGTAADIIKKAMISIADWIKTDTQGEIAMIMQVHDELVFEVDADKAETLKLKVCELMAK AANLDVELLAEAGIGDNWDQAH NT seq 2769 nt NT seq  +upstreamnt  +downstreamnt atgcctaccatagccaataacccacttgtccttgtggatggatcttcttatttatatcgc gcctattatgcgcctcctcacctgacaaactcaaagggcgaagctactggtgctgtttat ggcgtagtgaatatgctccgcagtttattaagccgttatcaacctagccatatcgctgtg gtgttcgacgctaaaggcaaaaccttccgcaatgacttatatgaagaatacaaggcacat cgcccgcctatgccggatgacctgcgctcacaaattgaaccactacaccgtattatccgt gccttaggcctgcccttaatctctattcctggtgttgaggcggacgatgttatcggcaca atcgctcgccaagcgagccgcgaaaaccgcgctgtactcatcagcactggtgataaagac atggcgcagctggttgatgaaaatatcacgctgatcaacaccatgacagataccatcatg ggtcctgaagaggttgcggctaaatatggtgttggcccagacagaattatcgatttcttg gcgttgatgggcgacaaggcagataacattcccggtttacccggcgtaggcgaaaaaacc gcattagctatgctcacaggggcgggtagtgtcgccaatttgcttgcagagcccgaaaaa gtcaccgaattaggctttaggggcgcaaaaaccatggcggcgaaaatcatcgacaatgcc gacatgctaaaactgtcctatgagcttgccaccattaaaaccgatgttgagctcgaacaa gattggcatgaactcgaagccaaacccgcagacagggatgagctgatcaaatgctatggc gaaatggaatttaaacgctggcttgccgaagtcttagataataaggcgccaacgacagcc gcagcaaaagtcgaaacgacagaaacccaagaagaaacagcgcccagcgtcacgattgaa acccaatacgatacgattctgaccgaagctcagctcgatgagtggattgccaaactcaag caagcgccattaatggccgtggataccgagaccaccagtctcgactatatggttgcggaa ttggttggcctgtcctttgctgttgaagccggtaaagccgcttatctgcccttagcccac gattatgttggcgcgcctcaacaattagacaagcaaactgcactcgaaaaactgcgcccg atactcgaagacgccaagctcaaaaaagtcggtcaaaacctgaaatatgatatcagcgta ttggcaaatgcaggcatacaactccaaggtgtggtattcgacactatgctcgaatcctat gtgtttaactcggtcgcctcacgccatgatatggatgggttggcgcttaaatacctaggc cataaaaatatcgcctttgaagatatcgcaggtaaaggtgctaaacagctgaccttcaac caaattcagttggaaacagcagccccttatgcggcggaagatgccgatataaccctacgt ctacatcaacatttgtggccaagactcgaaaaagagaccgaattagcctcggtctttacc gatattgaactgccgctgatccaaatactgtccgatattgaacgccaaggtgtgtttatc gatagtatgttgctcggccaacagagtgatgaacttgcccgcaaaatcgatgagttagaa acaaaagcttatgatattgcaggtgaaaaattcaatttaagctcaccaaagcaactacaa gtgctgttttttgaaaagctgggttatccggtcatcaaaaaaacccctaagggcgccccc tctaccgcggaagaagtactggttgagttggcattggatttccctctgcctaaagtgatc cttgagcatagaagcctaaccaagctaaagagtacttacaccgacaagctccctctaatg gtgaacgcgaaaacgggtcgagtacacacaagctaccatcaggccaacgcggcaacgggg cgtttgtcctcgagcgaaccaaacctacagaatattcctatccgcaccgaggaaggtcgc cgtattcgccaagcctttattgcgcctcaaggacgtaagattttggccgccgactattcg cagattgaattacggatcatggcgcatttatcccaagatgcgggcttactcaaagccttc gctgaaggtaaagacattcacagagccaccgccgccgaagtatttggcaccgactttgac agcgtcacctcggagcagcgtcgccgcgccaaagccgttaactttggccttatctatggc atgtccgcctttggattggcgcgtcagctcgacattccccgcaacgaggcacaaacttac atcgacacttacttcgctcgctatccaggcgtattaaggtatatggaagaaacacgagcc agtgcagcagaacttggctatgtctctacgttatttgggcgccgcctgtatttacccgaa attcgcgaccgcaatgcaatgcgccgccaagcagcagaaagagccgcgattaacgcccca atgcaaggcaccgctgcggatatcattaaaaaagccatgatcagcattgccgattggata aaaaccgatacccaaggtgaaatcgcaatgatcatgcaagtccacgacgaattagtattc gaagtcgatgccgataaagccgaaactctcaagctcaaggtgtgtgaactcatggcaaaa gcggccaatctggacgtggaacttctggcagaagctggtattggcgataactgggaccaa gcccactag

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