Shewanella sp. Arc9-LZ: GUY17_00065
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Entry
GUY17_00065 CDS
T10509
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea00071
Fatty acid degradation
shea00280
Valine, leucine and isoleucine degradation
shea00310
Lysine degradation
shea00362
Benzoate degradation
shea00380
Tryptophan metabolism
shea00410
beta-Alanine metabolism
shea00640
Propanoate metabolism
shea00650
Butanoate metabolism
shea00907
Pinene, camphor and geraniol degradation
shea00930
Caprolactam degradation
shea01100
Metabolic pathways
shea01110
Biosynthesis of secondary metabolites
shea01120
Microbial metabolism in diverse environments
shea01200
Carbon metabolism
shea01212
Fatty acid metabolism
Module
shea_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GUY17_00065 (fadB)
00650 Butanoate metabolism
GUY17_00065 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
GUY17_00065 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GUY17_00065 (fadB)
00310 Lysine degradation
GUY17_00065 (fadB)
00380 Tryptophan metabolism
GUY17_00065 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GUY17_00065 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GUY17_00065 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GUY17_00065 (fadB)
00930 Caprolactam degradation
GUY17_00065 (fadB)
Enzymes [BR:
shea01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GUY17_00065 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GUY17_00065 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GUY17_00065 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
GUY17_00065 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
QHS11626
LinkDB
All DBs
Position
complement(16760..18910)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAQGSVNKFDRETIASLDAALDSIKQNTNIKALLLTSA
KSTFIVGADITEFLTLFQQDDATLLAWVEQANAVFNKLEDLPFPTASAINGFALGGGCET
ILATDLRVADTNARIGLPETKLGLIPGFGGTVRLPRVIGADNALEWITTAKDQRPEDALK
VGAIDAVVAPENLEAAAIQMLHDALNGSLDWQARRTKKQSPLQLPKLEAMMSFATAKGMV
FSVAGKHYPAPMAAVNVVEQAAGLDRDGALKVEAQAFIKLAKTDVAQALIGIFLNDQFVK
GKAKKAGKLAKDVNQAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLNEAAKIL
TTQVARGRSTPEKMAKVLNNITPSLDYAAIKNSDIVVEAVVEHPKVKATVLAEVEGYVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRGEHSSEETIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLAEGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQKNTKGFYAYSVDRRGKP
KKDIDPTSYELLSAEFGELKAFESDDIIARCMIPMIIETVRCLEEGIIASPAEGDMGLVY
GIGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctaccattcaggttgagttacttgaagataatattgccaaactg
tgttttaacgcacaaggttcggtaaataaattcgacagagaaacaatagcctctcttgat
gccgccctagacagcatcaaacaaaataccaatattaaagccttgctgctgacatcagca
aaaagcacctttattgttggcgcagacattaccgaattcttaacgctatttcagcaagac
gatgccacgttgctagcttgggttgaacaagccaacgcagtattcaataagctagaagac
ttaccgtttccgacagcatcagcgattaacggttttgcgttaggcggtggttgcgaaacc
attttagcgactgacttacgcgttgctgataccaatgctcgcatcggtttaccagaaacc
aaattaggtcttattcctggttttggtggcactgtgcgtttacctcgagtaatcggtgca
gataatgcacttgagtggattaccacagctaaagaccaacgcccagaagatgcgttaaaa
gtaggcgctattgatgccgttgttgcaccagaaaacctagaagctgctgcgattcaaatg
ttgcatgatgccctaaatggtagccttgattggcaagctcgtcgcaccaaaaagcaatca
ccattacagttaccaaaacttgaagccatgatgtcttttgcaaccgcaaaaggaatggtg
ttttctgttgcaggcaagcattatccagcgccaatggccgctgtgaatgttgtcgaacaa
gcagctggtttggaccgtgatggcgcattaaaagtagaagcacaggctttcattaaatta
gctaaaacagatgtagcccaagcgctaattggtattttcttaaatgaccagttcgtcaaa
ggtaaagcaaagaaagccggtaaactcgctaaagatgttaaccaagcagcagtattgggt
gcaggtattatgggcggcggcattgcttaccaaagcgccagcaaaggcacaccaattgta
atgaaagacatcgctcagccagcattagagttaggcttgaacgaagcggctaaaattctg
acaacacaagttgctcgtggtcgttctacgccagagaaaatggctaaagtattaaacaac
atcaccccttcactagattatgccgctatcaaaaatagcgatatcgttgtagaagcggtt
gttgaacatccaaaagttaaggctactgtactagcagaagttgaaggttacgtatcagaa
gatgccattattgcatcaaatacctcgacaatctcaatcaacttactggctaaaagcctt
aagaaacctgaacgtttctgcggtatgcacttctttaaccctgtgcacaaaatgccatta
gttgaaattatccgtggtgagcacagctctgaagaaaccatcgcaacggtagtggcttac
gccagcaaaatgggtaaaaccccaatcgtagtgaatgattgcccaggcttctttgttaac
cgtgtattgtttccatactttgctggctttagtggtctacttgctgaaggtgctgacttt
gccgctgtcgataaagtcatggaaaagcagttcggttggccaatgggcccagcctactta
cttgacgtagtcggtttagataccggtcatcacgctcaagcagtaatggctgaaggtttc
ccagaccgcatgggtaaaaatggcaaagacgctatcgacattatgtttgaaaacaaacgt
ctaggtcagaaaaacactaaaggtttctatgcctattctgttgaccgtcgtggtaagccg
aagaaagacattgatccaacaagctatgaattattaagcgctgagttcggtgaattaaag
gcattcgagtctgatgacatcatcgctcgctgtatgatcccgatgatcatcgaaacggtt
cgttgtttagaagaaggcattattgcatcacctgctgaaggcgatatgggtctagtttac
ggtattggtttccctccattccgtggcggtgtattccgttacttagacaccatgggcgta
gcaaactttgttgccctagcagacaaatacgcacatcttggtggcttatatcaggttacc
gatgcaatgcgtgcacttgcagccaacaacggtagttactaccaagcctaa
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