Shewanella sp. Arc9-LZ: GUY17_00110
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Entry
GUY17_00110 CDS
T10509
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
shea Shewanella sp. Arc9-LZ
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shea03009
]
GUY17_00110 (rsmB)
Enzymes [BR:
shea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
GUY17_00110 (rsmB)
Ribosome biogenesis [BR:
shea03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GUY17_00110 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_25
Methyltransf_31
Methyltransf_5
Methyltransf_11
Methyltransf_37
Methyltransf_12
FtsJ
MTS
Methyltransf_24
Cons_hypoth95
BMT5-like
DUF4159
Motif
Other DBs
NCBI-ProteinID:
QHS11635
LinkDB
All DBs
Position
complement(27281..28564)
Genome browser
AA seq
427 aa
AA seq
DB search
MNVRALAAKAIYEVLEKGISLSVALPDQQQHLQNGKDKALLAELCYGVMRQLPQLDKCVS
DCLAKPFKGKQRILHQLLIVGCYQLYFTRIPAHAAISETAEACRQLRFDGLVKVVNGVLR
NIQRQDSALNTDSDTLRFNTPAWFIKRLQQAYPDNWQDIIEQSHQRPPMWLRNNQQSQTC
DAYLAALAQHDIPAQAGSSQDAILLESAKDVAALPNFMEGAASVQDGAAQWAATLLAPAA
DELVLDACAAPGGKSCHLLELAPTINLVAVDFDQKRLARVQQNLDRLHLKAQLIHGDAAD
IPSWWQGQQFDRILLDAPCSATGVIRRHPDIKWLRKNSDIEELANLQKQILDHCWQWLKP
GGTLLYATCSILPQENSQQVEQFLARTPDASLVPIEQQAHISDIGWQILPGQDNMDGFYY
ARLVKAI
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcgcgcactggcagctaaagcgatttatgaagtccttgaaaaaggcatttcg
ttatcggtggctctacccgatcaacagcaacacttacaaaatggcaaagacaaagcccta
ttagctgaattatgttacggcgttatgcgtcaattaccacaactagacaagtgcgtgagt
gactgcttagcaaaaccgtttaaaggtaaacagcgtatattgcatcaattgctgatcgta
ggttgttatcaactctactttactcgtattccagcgcatgcggcgatctcagaaacggca
gaagcttgcagacaattacgttttgatggtttggtgaaagtggtcaatggcgtattgcgt
aatattcagcgccaagacagtgcattaaatactgactcagacacgctacgttttaatact
ccagcttggtttattaagcgtttacaacaagcgtatccagataactggcaagacattatt
gagcagagccaccagcgtccgccaatgtggctacgcaataatcagcaatcacagacatgt
gatgcttatttagcggcactagctcaacacgatattccagcccaagccggttcaagtcaa
gatgctatattgctcgaaagcgcaaaagatgtcgcagcattacccaactttatggaagga
gctgcatcggtgcaagatggcgcggcgcaatgggctgctaccttacttgctcctgcagca
gatgaactcgttttagacgcttgcgccgctcctggcggaaaaagttgccatttactagag
cttgctcccactatcaacttagtcgctgtcgactttgatcaaaaacgccttgctcgagta
caacaaaatctggacaggttgcatttaaaagcgcaacttattcacggcgatgcggcagat
attccatcatggtggcaagggcaacaatttgatcgaatcttgcttgatgcgccttgttct
gcaactggggtcattcgccgtcacccagacataaaatggttacgtaaaaatagcgatatt
gaagagttagccaacttacaaaaacaaatattggatcattgttggcaatggcttaaaccg
ggtggcaccttattatatgcaacctgttctattttaccgcaggaaaacagccaacaagtt
gaacagtttctagcacggacacccgatgcgagtttagtaccgatagagcaacaagctcat
atcagtgatatcggttggcaaattttgcctgggcaagacaacatggacggcttctattac
gcgcgcctagttaaagcaatttaa
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