Shewanella sp. Arc9-LZ: GUY17_02450
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Entry
GUY17_02450 CDS
T10509
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea00300
Lysine biosynthesis
shea00470
D-Amino acid metabolism
shea01100
Metabolic pathways
shea01110
Biosynthesis of secondary metabolites
shea01120
Microbial metabolism in diverse environments
shea01230
Biosynthesis of amino acids
Module
shea_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GUY17_02450 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GUY17_02450 (lysA)
Enzymes [BR:
shea01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GUY17_02450 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
TrmO_N
Motif
Other DBs
NCBI-ProteinID:
QHS12056
UniProt:
A0AAE6SPS1
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All DBs
Position
541440..542684
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AA seq
414 aa
AA seq
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MDYFSYQNNSLFAEDCDVAKLANTHGTPLYIYSRATLERHWHAFNNAVADHPHLICYAVK
ANSNLAVLNVLARLGSGFDIVSGGELSRVLQAGGDPKKVVFSGVGKTVAEMEQALNIGIY
CFNVESSAELEQLNDVARRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEV
VFARAAELVHLHVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLGELGIQIEHFDVGGGL
GVTYNNETPPHPDVYAAALLDRLNGRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
AIVDGAMNDLIRPSLYSAWQNIIPVQQNDAPTFAYDIVGPVCETGDFLGKDRQLAVKSGD
LLAIRSSGAYGFAMASNYNSRPRVAEIMVDGGNDFVVRQRETLEQLWQGEHLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttttcatatcaaaataattcactattcgcagaagactgcgatgtagcaaaa
ctggccaacactcacggtacgccgttgtacatttattctcgtgccacattagagcgccat
tggcatgcttttaataatgccgttgctgaccatccgcatcttatttgttatgcagtgaag
gcgaattcaaaccttgcggtattaaatgtattggctcgcttaggcagtggttttgatatt
gtctctggcggtgaactctcgcgtgtgctgcaagctggcggcgatcctaaaaaagtggtt
ttctctggtgtgggtaaaaccgttgccgaaatggagcaagctctgaatattggcatttac
tgttttaatgtcgagtcgagtgccgaacttgaacaacttaatgacgtcgcgaggcgcttg
ggtaaagtggcaccagtttcattgcgcattaatccagatgttgatgccggtacgcatcca
tatatttcaacaggtcttaaagaaaataaatttggcattgccatggaagaagccgaagtg
gtgtttgcccgtgcagcagaattagtccatttacatgttaaaggtgtggattgccatatt
ggttcacagctcaccgaaataaagccatttttagatgctatggaccgcatgcttgcattg
atcgatcgcttaggcgagttaggcattcaaattgaacattttgatgtgggtggcggctta
ggggtaacatataacaatgaaactccgccacatccagacgtatatgctgcagcattactt
gatcgcttaaatggccgtaaattgaagttaatttttgaaccaggtcgtgccattgctgcc
aatgcagggattttcgtcactcaagtgctttatctgaaagaaaatagtgataagcgtttt
gccattgttgatggtgcaatgaatgatcttattcgcccatcgctgtatagcgcatggcaa
aatattattccggtacaacaaaatgatgcgccaacctttgcttatgatattgtaggtcca
gtatgcgaaacgggtgactttctgggtaaagacagacagttagcggttaaatcaggcgac
ttattagcgatacgctcaagtggcgcttacggttttgcgatggcctcaaattataattct
cgcccaagagtggctgaaattatggttgatggtggtaatgattttgttgttcgtcagcgt
gaaacgctagagcaactttggcaaggcgaacatttattgccatag
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