KEGG   Shewanella sp. Arc9-LZ: GUY17_02450
Entry
GUY17_02450       CDS       T10509                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
shea  Shewanella sp. Arc9-LZ
Pathway
shea00300  Lysine biosynthesis
shea00470  D-Amino acid metabolism
shea01100  Metabolic pathways
shea01110  Biosynthesis of secondary metabolites
shea01120  Microbial metabolism in diverse environments
shea01230  Biosynthesis of amino acids
Module
shea_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:shea00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GUY17_02450 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GUY17_02450 (lysA)
Enzymes [BR:shea01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     GUY17_02450 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955 TrmO_N
Other DBs
NCBI-ProteinID: QHS12056
UniProt: A0AAE6SPS1
LinkDB
Position
541440..542684
AA seq 414 aa
MDYFSYQNNSLFAEDCDVAKLANTHGTPLYIYSRATLERHWHAFNNAVADHPHLICYAVK
ANSNLAVLNVLARLGSGFDIVSGGELSRVLQAGGDPKKVVFSGVGKTVAEMEQALNIGIY
CFNVESSAELEQLNDVARRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEV
VFARAAELVHLHVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLGELGIQIEHFDVGGGL
GVTYNNETPPHPDVYAAALLDRLNGRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
AIVDGAMNDLIRPSLYSAWQNIIPVQQNDAPTFAYDIVGPVCETGDFLGKDRQLAVKSGD
LLAIRSSGAYGFAMASNYNSRPRVAEIMVDGGNDFVVRQRETLEQLWQGEHLLP
NT seq 1245 nt   +upstreamnt  +downstreamnt
ttggattacttttcatatcaaaataattcactattcgcagaagactgcgatgtagcaaaa
ctggccaacactcacggtacgccgttgtacatttattctcgtgccacattagagcgccat
tggcatgcttttaataatgccgttgctgaccatccgcatcttatttgttatgcagtgaag
gcgaattcaaaccttgcggtattaaatgtattggctcgcttaggcagtggttttgatatt
gtctctggcggtgaactctcgcgtgtgctgcaagctggcggcgatcctaaaaaagtggtt
ttctctggtgtgggtaaaaccgttgccgaaatggagcaagctctgaatattggcatttac
tgttttaatgtcgagtcgagtgccgaacttgaacaacttaatgacgtcgcgaggcgcttg
ggtaaagtggcaccagtttcattgcgcattaatccagatgttgatgccggtacgcatcca
tatatttcaacaggtcttaaagaaaataaatttggcattgccatggaagaagccgaagtg
gtgtttgcccgtgcagcagaattagtccatttacatgttaaaggtgtggattgccatatt
ggttcacagctcaccgaaataaagccatttttagatgctatggaccgcatgcttgcattg
atcgatcgcttaggcgagttaggcattcaaattgaacattttgatgtgggtggcggctta
ggggtaacatataacaatgaaactccgccacatccagacgtatatgctgcagcattactt
gatcgcttaaatggccgtaaattgaagttaatttttgaaccaggtcgtgccattgctgcc
aatgcagggattttcgtcactcaagtgctttatctgaaagaaaatagtgataagcgtttt
gccattgttgatggtgcaatgaatgatcttattcgcccatcgctgtatagcgcatggcaa
aatattattccggtacaacaaaatgatgcgccaacctttgcttatgatattgtaggtcca
gtatgcgaaacgggtgactttctgggtaaagacagacagttagcggttaaatcaggcgac
ttattagcgatacgctcaagtggcgcttacggttttgcgatggcctcaaattataattct
cgcccaagagtggctgaaattatggttgatggtggtaatgattttgttgttcgtcagcgt
gaaacgctagagcaactttggcaaggcgaacatttattgccatag

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