Shewanella sp. Arc9-LZ: GUY17_02580
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Entry
GUY17_02580 CDS
T10509
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea00860
Porphyrin metabolism
shea01100
Metabolic pathways
shea01110
Biosynthesis of secondary metabolites
shea01120
Microbial metabolism in diverse environments
shea01240
Biosynthesis of cofactors
Module
shea_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
GUY17_02580 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shea04147
]
GUY17_02580 (hemB)
Enzymes [BR:
shea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
GUY17_02580 (hemB)
Exosome [BR:
shea04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GUY17_02580 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
COE1_HLH
Motif
Other DBs
NCBI-ProteinID:
QHS12079
LinkDB
All DBs
Position
complement(569431..570444)
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AA seq
337 aa
AA seq
DB search
MNIITSAFPLRRMRRMRKHEFSRRLMSENTLTVNDLIYPMFVLEGFQRSEKIASMPGIER
FSVDLLLKEAAELVELGIPLIALFPVTPADKKSLLAEESYNPDGLVQRAVRELKQAFPQL
GIMTDVALDPYTTHGQDGIIDDTGYIMNDITTEILVKQALSHAAAGADIVAPSDMMDGRI
GAIRQALEENGFVNTQIMAYSAKYSSSYYGPFRDAVGSASNLKGGNKHSYQMDPANSDEA
LHEVALDIQEGADMVMVKPGMPYLDIVRRVKTELAVPTFAYQVSGEYAMHMAAIQNGWLA
EKAIVMESLLCFKRAGADGILTYFAKRAAQWLKEQNS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
ttgaatattattactagtgcctttccactgcgcagaatgcgccgcatgcgtaaacatgaa
tttagccgtcgtttaatgtctgaaaataccttaacagttaacgatctcatttatccaatg
tttgtgttagaaggttttcaacgctcagaaaaaattgcttcaatgccaggaattgaacga
ttttcagttgatctattgttaaaagaagccgctgagctggttgagcttggcattccgctt
attgcattattccccgtgacgccagcggataaaaagagtttactggcagaggaatcttac
aatcctgatggattagtgcagcgtgccgtgcgtgaattaaagcaagcattcccacagctt
ggtatcatgactgatgtagctttagatccctacacgactcatggtcaagacggtattatc
gatgacactggttatatcatgaatgacatcaccaccgagatcctagtcaagcaggcttta
tctcatgccgctgcgggggcagatattgtcgcgccatcagacatgatggacggtcgtata
ggtgcaattcgccaagcccttgaagaaaatggctttgtgaatactcagatcatggcttat
tccgctaagtattcctcaagttattatggtccttttcgtgatgctgtcggatcggctagt
aatttaaaaggtggcaataaacacagctaccaaatggatccggccaatagcgacgaagca
ttacacgaagtggcattagatatccaagaaggtgctgacatggtcatggttaaaccaggg
atgccttatttagacatagtacgccgtgtcaaaactgaattagcagtgccaacatttgct
taccaagtcagtggtgagtacgccatgcacatggctgctattcaaaacggttggttagca
gaaaaagccattgtgatggaatcattactttgctttaagcgcgctggcgctgatggtatt
ttaacctactttgctaaacgtgctgctcagtggcttaaagaacaaaactcataa
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