Shewanella sp. Arc9-LZ: GUY17_03325 Help Entry GUY17_03325       CDS       T10509                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism shea  Shewanella sp. Arc9-LZ Pathway shea03018   RNA degradation Brite KEGG Orthology (KO) [BR:shea00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     GUY17_03325  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:shea03019]     GUY17_03325 Enzymes [BR:shea01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      GUY17_03325 Messenger RNA biogenesis [BR:shea03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      GUY17_03325 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII CMS1 P-loop_SecA Helicase_C_2 Lyase_1 AAA_22 UBA_3 Motif Other DBs NCBI-ProteinID:  QHS12218 LinkDB All DBs Position 754133..755398 Genome browser AA seq 421 aa AA seqDB search MSFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLL HQLLTHKDALVAQPDTQYIHLTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGG VSIGEQIRLLANGTNILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVE VLKRLPSTRQTLLFSATLDDRMLSFSRRLLRSPQVIEVAQRNTTASSIVERVFNVDANRK CAMLCHLISQEGWQQSLIFSRTKQGADALVKQMNQAGVAAEAFHADLTQAAREQVLAAFK AGDVAALVATDVAARGLDINELNYVVNMELPFQVEDYVHRIGRTGRAGKAGQAITLLSID DEPLLTKLEAFLDRRLPQQWLAGFEPDLDLIAPVTRKTTKSALKKQARKKALAASSRGKK R NT seq 1266 nt NT seq  +upstreamnt  +downstreamnt atgtcttttgcagatttatcgttacatcccatattgattaaccgcctagctgaattaaaa tatcagcaacctacgccgatccaactacaggctattccggttattttaagcggtaaagac gtgatggcgggggcgcaaacgggcaccgggaaaacggctgcttttgcattaccgttactg catcaactattgactcataaagatgctttagtcgctcagccagatactcaatatattcat ttaacccctattaccgcgcttgtattagtcccaactcgagagttagcccagcaagtgcac agtagtattgagcaatatgcttatggcagttcagtcactagcgtgatggtttatggtggg gttagcattggtgaacaaatccgcctgttagccaatggcactaatattttggtggcgact ccagggcggttattagacttgctgcgtaagcgtgcgttgtcattgtcgcaattaactcat ttggtatttgatgaagccgatcgcatgctggacatgggctttaaagatgaaattgtcgag gtgcttaagcgtttaccaagtacacgacaaacattattattttcagccaccttagatgac cgtatgctcagttttagccgacgcttattacgctcaccacaagtgattgaagtggctcag cgaaataccaccgccagcagtattgttgagcgagtgtttaatgtcgacgctaaccgaaaa tgcgccatgctgtgtcatttaatcagccaagaaggttggcagcaaagcttaatatttagc cgcaccaaacaaggtgctgatgcactggtaaagcagatgaatcaagctggtgtagcggct gaagcatttcatgctgacctaactcaagcagcacgtgaacaagtattagcagcatttaaa gccggtgatgtggccgcgttagtcgccaccgatgtggctgctagagggttagatattaac gagttgaattatgtcgttaatatggagttaccgtttcaagttgaagactacgtacaccga ataggccgcacaggcagagcaggtaaagcagggcaagctattacattattaagcatcgat gacgagccattattaactaaactagaagcctttttagaccgacgtttaccacagcaatgg ctggcaggttttgagccagaccttgatttaattgctccagttacccgtaaaacaaccaaa tctgcattaaaaaaacaagcccgtaaaaaggcattagcggcatcttcacgcggtaaaaaa cgctaa

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